jgi.p|Nanoce1779_2|600351, gene_7878 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|600351
Unique Namegene_7878
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:57652..64144 +

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Properties
Property NameValue
TranscriptId600437
ProteinId600351
Product nameATP-binding cassette superfamily
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:57652..64144 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008559xenobiotic transmembrane transporting ATPase activity
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00570NO26G00570Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600351mRNA_7878-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|600351mRNA_7878Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|600351

>mRNA_7878-protein ID=mRNA_7878-protein|Name=jgi.p|Nanoce1779_2|600351|organism=Nannochloropsis oceanica|type=polypeptide|length=1275bp
MAAANTAIEMPAEATTSKVVAVAKAAPAPKVELAPYSDLFYFADGLDWVC
MFLGTICACATGVAMPAFMLIFGSLLDEIGKGQGSFQDTINQLAMAMAAL
GAGAFLVSALQVAFFAFASARQTERLRATLLRSILRQEIGWFDTNNGGEL
ATVLSEATTSFQEGTGRRVADGIQGLAQFVAGLVIAFTQSWRLSLVLIAG
LPLIGGAAAALSSVMSEAQSASTNQYAKAGGVASEALGAIRTVASLGAER
KFTAAYNKLIEEAEKVGIGKSLKLGAANGMLFSSAFFIYALAFWYGSQQV
ANDLECVQSGGVGCITGGAVITTFFSFLIGAFSLGQLAPSLNAVAVARTS
LVRVMRIVKRTPAMDALSKDGKTLQNVRGDIEFDVEDFHYPARPLNRVCN
NYKLSVQAGETIALCGPSGSGKSTAISLLLRFFDPVVGTITLDGHDIRSL
NINFLRDCIGYVGQEPVLFTGSIADNIRTGKPGATDEEVIAAAKAANAYD
FCMALPEGLKTEVGQRGSQLSGGQKQRIAIARAIIKNPAILLLDEATSAL
DSQSEKVVQEALDNLSRTKKRTTFVVAHRLSTIRNADKIAVIDKGQVKEI
GSHDELLTLNSLYAELVALQGGNVQEEAVACGAGEVVKEEAPPVLVKAMS
TGYAGLGLSVRRLSRAVSHALRQSLTFYEDDKKEARPSLWGLSFRHWPYL
TVGLLSNCALGVLFPLWGYLLANVMNVFYSMDKNYIIERGSFWAGMFVLL
GISAVTFYTTAFWGLGNVSERLACWLRKSCFEAMIRRNIGWFDMPENNLG
ALSSRLETETQQIHKISGDMLGRQCQAFFTLFVGLLIAMTASWEIALVTL
ATFPIQAGANAIQMQIALGQVSEKAGSEGGEEASGLLSAAITSIRTVAAF
SMQEGMLTKYGVAIAPLAARKKVKGVVSGIVFGLTQFVMFATYGLLFWFG
GNLVSDGKYTFEQMMQAIMSILMGAMGLGQALTDMADVKEGREATNRVLD
LVYSEDQQIDSLASTGARLSNVKGEIEFKNIAFRYPARPDQYILGGPDKP
NGFSLCIPAGQTVAFVGQSGSGKSTTVALTMRFYDPEAGTVCLDGMDLKD
INVKSLRQHISYVGQEPILFKGTVAENIAYGLEGATRDQIIAAAKAAHAH
DFIMQFSDAYETDLAEGSINVSGGQKQRLAIARAIIKDAPILLLDEATSA
LDNESESLVQEALDDLQKQKKRTTLVIAHRLSTIRDADLIVVMRYGEIVE
QGTFKSLMAGNGSFAALAHQQGLS*
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Synonyms
Publications