jgi.p|Nanoce1779_2|673058, gene_7862 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673058
Unique Namegene_7862
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_22:84..19088 -

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Properties
Property NameValue
TranscriptId673144
ProteinId673058
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_22supercontigscaffold_22:84..19088 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:00084083'-5' exonuclease activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL037ncniL037Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO26G00450NO26G00450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673058mRNA_7862-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673058mRNA_7862Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673058

>mRNA_7862-protein ID=mRNA_7862-protein|Name=jgi.p|Nanoce1779_2|673058|organism=Nannochloropsis oceanica|type=polypeptide|length=1822bp
MAAGSSLDTPKAFGTVSMSDATRQILAFEFLADILVSHSMPRVKQKANLE
VIEEQAKSSDHAEINPPGLSPSRIPAKEEAKGGGEGGGAAGEAFASPLAW
WKGVSTYVSKAISSVIISGSGQKVKRGGGEGEGAEGRRLEGISESGEGHT
KKRQRTTAANPKTTCSQLQPDNNGNTKWSTPGGNKAATATCLIMESSFPA
AISSTNPSTATIGRSSSSNGSSSGISGSDSGINNSSSGSNNNKSSSSSSL
FSSASRRELSRTMVGDELGYSAKKQYVLRRRGVIGDPEVVSLPWGDSRTV
MVLGRASNKDNEAWIAGRPYKLRLGIVARGNAHSDRKDKVNCISRSQATL
SIDRGTGVFRLRNADNVRAPILLSRRPRGWGMLMKEEISIKLDKGQEHEM
RVGDEVQLDGHDLETPEMVWRLECVNEKSGSIPSSLPSSPLSSAVQKKKK
ILEGEEAGSFSSPVGGREGGRKGIMSPWVSDCNRKREKALIKMKGGTEGR
RDGGTEGEEEDDPMLIDLLGRGPEEEGWRKGRREMGGNRGGGGGGGGGGL
EVGQTVKVKARRGPGRLRAGGIARVTAVHETDEEEGGEEEGVGEEGGGRG
RKKRKVYDVKYVIEAMRSSSSSSNNNRRRQGRLQRQRVKVEEEEDEDEEE
EEEEKEEEEKEEEEEEEKEEEEKEEEEEEEEEEEEEVGWREGGREEGKGV
VTLIPMRKEVEARRRERVAAVRGWRDERKRRKKEREMRKREERRNGGRGK
EQQGAGSGEESDGDGDDEEKEKENEEEEEEGGGGIEGCGFIVFLLWAAIP
PADSDKMAAHVGRCQSIRVKEKSEGGAEVSNEEEEEEEEEEEEEEVEVVV
MEEGREGGTEGGTKGGNGKGEMIEIVDSDDSSVEEEREEGRKEELELSKV
PSAMPSGLVSAMLSNLTVQDPTFVLSTLEIFLHPSFPHSLLPSLRLPPAV
LTALMKAQCPYRIQCFARMLEGMQDAFPPHRVPTAWRLASFPTLEELVRG
SALKDPRKALAHIRALATVTRAFAEEANDLCSGVFELPSSLPPSLPPSSP
ARLARTHLARLVDSVSLVPAEKGKSTAAAVAGQGMRQAVSSLLDAAIRAC
AHDYSLAGALPPSLLPSSSSSRSSSSFMSRSRTGRREGGREGGREGGRGF
VSRTAELRGEREGRKGKEREEGKQKKKTKWGKDRMKWLLWGEGPESQRVR
VLSSLGWCALEAYHALVAAKYQHPSFLLPLPAQLLEDSIARRVRQLTSSS
SLSSFASFPPASLHAALRRTFYRHVTMALEEGREGGREGGQAPVERARRV
LGNGSSVPTISSTSISDRSRRYCHHARACFYSLRGVTLTVLSFFFLTSSI
VVGLASAARLQPPLAAAGAASSSMVGGGGGVGAVVVVKGSSSGRERILFL
SRRLGLAYEGGRGGEGKGGDGGLPRNDAPIIRTRNFLTPLHAATSSASSP
SSSSPPSSASASAVTSKPQWTKQQQQQQQQQQSLSSTSYMEKREGEGEDE
VYGLRDTYSHSPTEDVGRGVVPGGGEGHLSPPYELLPEERVADLNLKTEG
PVGNGRVICFSIYGGPEVDFGHGKGTTLWVDNMGVSEGVLSEFKDWFKDP
ATKKVWHNYGFDRHVLYNEGIDCLGFAGDTMHMARLWDSSRDKASAVNTK
GAAAGGAAGAAAGAEGEVVATKGYSLEALSKELVPGMAKTASMKELFGVK
STRKDGSEGNLVRIPELREIQTDPAIRLRWIGYSALDALSTWALREELEK
RLKSVHWEREPLDAVGQTDDATMYDFYQRYFVPFATVLTDMERIGIRVDA
REYLASVQVQAEKDKEAALER*
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Synonyms
Publications