jgi.p|Nanoce1779_2|169310, gene_7815 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|169310
Unique Namegene_7815
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:392214..401451 -

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Properties
Property NameValue
TranscriptId169396
ProteinId169310
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:392214..401451 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0008270zinc ion binding
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL035ncniL035Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G00700NO17G00700Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|169310mRNA_7815-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|169310mRNA_7815Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|169310

>mRNA_7815-protein ID=mRNA_7815-protein|Name=jgi.p|Nanoce1779_2|169310|organism=Nannochloropsis oceanica|type=polypeptide|length=2814bp
MGDNEEWEEVVDPTTHKTFYVNHWTQETRWHKPNASVPLPSGWEEARDAE
GRIYYIDHATRSTSWTDPRRRSNSGGGNTSSSSSPRHPPPSSSSSSSSSS
SSSSSSSSSVSASRHRSRAGLATIEGTSYPPNISTRNDGLSSSLSSSSSA
RPPTVERRNSLSRLPSIINQNLPSLTSIRGGIEGGVGSLGLGGMHSGLTA
PPANLASLQTYDPVKMQELKEDDVDPFYVPDGMRTGCSLCGIKFQLVVRG
RHHCRCCGEIICEKCSQSKIVLPRHHEAFKRSSSSSSGSSSSGSSSSSSS
SSSSSNSSNATGKEGGTDVGHRVCDVCHTHIATHGNYRCLIRYITTLRAG
REGSTAAQRYVALRLLVEAMDPHAHWKGDIKLGDDGAQKMAELQLAGGPE
AVSEALAPLLVAAADAVDTVPPPAPPIPVRHMALVALGHIIAIAFSHPSY
RQPYASHLPPLLPLVLASLDEPALQEHAARVVYYAAAEPACQKSLKQVSA
WHRIFDLLTSPNAAVQRWVAASVRPLMAGNRALLDFLLTSGSLFVLGCLL
CSDLPDVQAHALSAISAVIRTASMVEVEGGEEEGEEREEEEDDGESGDEE
ERGKERGRKRGRVRKEDTVAITQVITMVADAGAMGVVVQSIASTDLRVAT
QAISLAALMTRRPKVARTLWEEGVIRAVVEFLTAHPAAGIRTVQSALAIL
SNLTRLGGEGGVAQVHAEGGLKLALHYLDNADVSIRDQAAAMLRFFSLHK
EYCSEIVHGGDGTGLVRLASHLDREDMHIDSPVFPVPLYYNALVSLVQIA
LACREGDPAVVSVLQRGLLSSSCLSLLHVPNPHVIRQVLRLIHALANSTS
STVRSLVLASVSVDSASSSSSSSSSLLFPIIQLVGTESPGIVEAALLLLT
RLCGFYAPVPPEELAFVRPSSSSASSSTSWQQQILEETAAATGGIDTTLL
GSTDNSNSNNNSYIDDAGSEEELCVLHLPSSDPSSLMIRRIISQCGLPSP
LLSLFTRFALSPPSPPSNPSPPPPTTASSSSSISNVPSVQVQKSHIILTA
ALRLLKALATQNPAGARRLVDTGGMALVVRSLSTAAPPAGTAPTAAPVAG
LGVGRRDGDRLGYALALGTFKEICVYAGKSPELAAGIEVVARGLREGGGK
DALEAVRILEACSGNSACWVPLVSKALPGLIEQLMGLQLSREGGREGGMA
VATTSSDASSSSSSSSSSSCQTILQGILHILQRISVLTSHAEEVLHQGGL
FPLLSLLSCADAHLLNGHAPLLLSTLLTLHTILQHDTCRDTPLRKDQAIV
LLRFLALPSSLPLRMSAHAYACLELLLINAPDVAVGLGRERRTVTMLVAK
DGGKKGGEEEEEEGEEVEEEEVKGEDVVSSRSSIQEARRRVLYRIVAAAA
EGEEQERGDGGGGGGLEGGSDAEVIITNMVHTRNASLLLYLLSARMSDIP
PPAARRAQGRACEAIGRLISRSLNPRTEAAGLVEQGLLKEVSTVVTEVPA
AMFTLSVLCDADPHIALALLEHPAFLHRAVALMEAGRGYSTSSSPSSSVQ
RDASAAMHILSLAIQHREEEEEEEEEKEQQLQQQRPRICGAQRLRAAFHS
AGLLKPLLTNVTLLAQHLPPSHSPALPSSTLDVLHVLIATLYPYEEEGGE
RKEGGKEGRREKGFPLIDEDDRVLLHACPAVVLAVKTLNRSSSGSSSTDS
STNGSNDYPLSTSATAATAVTAAAASTHRRARLCLEQLSHKTKFAKILVA
KGLISYLLSSLATATADAASAWKGGGKDGGLTGAPVDREEGGKEGGRGEW
SVKVNLRTLLRLCEAMPTVVPWEVVQEGGEDGVPAIYDGLNTLLHFLSPS
STHPSSSYSSSYSSSSSSWASESVRELTLEILRCCSAAGVGVRRRLLLPQ
KGLVPLLVGFIDELTCPTTTERRVVGREGGQEGGQEEEAGVAATTMPVRK
SRPLVDDQSAREGGREGAREEEVGPKEARDGLLPRTSSPSPVEKEEGKGG
RKGGQEGMDGDSTNVKEEIVEGGAEEGEEGEASVSPQEHVERSREGSSVI
GDMPEERQEKEKKEEEAEEKKAGRAAATAAAAVAGPLTVRSVVQAIILPS
SLTPSSEAWRSLLSVLRLLTNLTSLDEARLGVASIVFAKATALLRATVAS
AAPAAPAASAAPAAPAAPAAPAAPAAPAGGCRDSEEGEEKGREDEGGRDE
LLLCLGSLLQQLAVAGMDFEEGEEGGGEKGAFSALGPATEAVVAALHKAL
LQPSSSSSPPPSLLLQEASLHLTFALISLSSTPAGHAVLFSPSCLPSLLS
LLSLIPRWLETRAREGGRTTSFQNGSKKPEGRTLAEAFRDECHVDEMKRL
SDEEHEEGEKEDGREGGKEGAIDAVQARLGHALLSLLVSLSSSGGGGGGR
GGEGGKQGQGRKERLLLLLPAVPAAAAYVRVLGGKIQDEGESGRGLSFSN
VWIATLRQAFLLLENLCALRPARVQLVSLFREDTRLVSAWVRERGRRVVC
DSVMRVDWLLGEVEEDPRRKEEEEERRKRQAAKERLMAQEKEEERNRRGS
GEKKRQEGSVGGRNSSSTSTSSSSSSSSSSNSTNGQLCHDSSAAGGEGRE
EGREGRRRERTVSFPAVGGRVGGRVRGSASAGAPLSSSSSSSSSSSRHRR
GRSLGAGLTSPPSPPSYSSLPPSYTSLLAQIPARNSTGPLVPQSSPLSFS
SPSSSSSSSPSSSFVGSSPLRTSPPPASLPPQKAGEKSSSSSSSSSTSST
SSSRGSSRKSSILTFAPLMEDSGENAFAAPCGGCGGLLPLPDGHEDYSNI
RCGKCGKKLAMCM*
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Synonyms
Publications