jgi.p|Nanoce1779_2|672955, gene_7720 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672955
Unique Namegene_7720
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:163058..168923 -

Link to JBrowse

Properties
Property NameValue
TranscriptId673041
ProteinId672955
Product nameSec1-like protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:163058..168923 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006904vesicle docking involved in exocytosis
GO:0016192vesicle-mediated transport
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0004045aminoacyl-tRNA hydrolase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL035ncniL035Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01710NO17G01710Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672955mRNA_7720-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672955mRNA_7720Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|672955

>mRNA_7720-protein ID=mRNA_7720-protein|Name=jgi.p|Nanoce1779_2|672955|organism=Nannochloropsis oceanica|type=polypeptide|length=1037bp
MGTNLRQTQTAALNRMLNFNIPFSDGEAGGGAAEWSDHWKVLVYDRKCRD
IISPLLNVSKLRKRGVTLHLLLESEREDIPDVPAVYFVEPSEENIARITD
DLNKRLYSAMYLNFTSKLDRSLMERLAKNAIAANTYSLVTKVVDQYLDFV
TLEPCLFTLNQPNSYMGYNNPGASEADMEAYARAVTYGLFSVLATVGTVP
VIRCASGGPAEMVARQLNDLVSEHLLANTPFFARGTGSTAAAFHRPLLIL
FDRNDDLITALHHTSTYQALVDDVLPHKLNRVTIESRPEEEGGAVKRRSY
DLDVESDHFFSRYAGALFPEAIQANGAELAEVSKKEEEIRSKTIHQLGMG
GGGGGGGEDPAQDGSAQELLSAVDSLPKLLERKKSLEIHTNILQAIMNVI
AAREVPVLFDLEESMVMSSRADKATVKALLADPSKGSLQDKLRLLAVYTL
SSNASNADLQELNEAVRQAFPSGTPGVFAAGGGAWPTPEEVELGIGAVDY
LRRQRAMQHLPDRAELETNRTGGRSAGGAGGRGGMGGGGTGVVALGGESG
YMSHFINKAQSQATDLLAKASNLLARRNSPYVTRVVDNLCSFKPNSEDES
FLYLDPKVKGVNPSNVKGRAPFREVIVFMIGGGCYAEYQNLQEYSRQQPP
AIPRQVLYGCTELLNTEGFLTQLVELGRKSNVVLMVMSRLPGAGGFLLAS
CSSSRASLLSDAHRANVGSAVTTILSWYVPRSGNRILTSSTAGSDDRKAE
GDEATSDSILTTPQPRPSSTLPASQTPKTAIGIPTGKTTGATTAAAAAAV
TKNKPQPAKLSQSKNLLIVGLGNPGKDYTMTRHNAGFLVIDELAKRMGVN
FKLRSAFQGEYGSTTYQGKSIGLLKPTTYMNNSGQSVRKVCGYKGGIHSW
GEMDFSCLCLYFPCFPFFAPQQVLDYFKLPLSSVLVVVDEVALEMGQIRL
RQTGSAGGHNGLKSIEGHLKSKDYNRLRIGVGGAAPGRMVDHVLGEFSRS
ERKLLDDLLMNAVEAVEDWIEDDNTNNVMTRVNAPR*
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Synonyms
Publications