jgi.p|Nanoce1779_2|632437, gene_7707 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|632437
Unique Namegene_7707
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_21:125429..133385 -

Link to JBrowse

Properties
Property NameValue
TranscriptId632523
ProteinId632437
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:125429..133385 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL035ncniL035Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO17G01850NO17G01850Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632437mRNA_7707-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632437mRNA_7707Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|632437

>mRNA_7707-protein ID=mRNA_7707-protein|Name=jgi.p|Nanoce1779_2|632437|organism=Nannochloropsis oceanica|type=polypeptide|length=2322bp
MKGLPESGAHESSEEEDILCAVCGEGHSEDDNQIVLCDHCDLSVHQGCYG
VEAIPVGKWFCRLCEYGMDCRKVRCALCGHGGGAFKATTAGDWAHIQCAI
WLPDVGFTQPDKLELIDYSRMAPARRTLKCIICQEKKSGPCVQCPVGKCH
LSFHPWCLLYREHPDIYVPPTEYEAFCKKHSPPIGDRKPQLLLKVQDYYT
SGKGGSGGQEPIRETGVPGAPVGGGGGRGARGGGRGSRGGGRGSRGGARG
AGGRGGMPCWPPLPARKNLGRGGTRGGGGASGRSSPRIFGGASVASEGVG
DDTSSFAGEEGGGGRGEGEVVPLFSEYPGQNLNEQLDLDHFWSAVNMFFP
DDHSPAFLQRIRLAVLPVEAPVGGASDDDHPIFRFPRVQGAKYASDGESG
GREEKRIGSHPVPRREKSSSSSTDEEGKREEEEEESVWALDDLDDIEEGS
LSEASYEGDEERPAEAFLVQLKRRLRLRQQEQESAALASDVTSISLEGKA
ARDRSSSSSNGGRGRDIEMIFQTQANGQQRILSSYRATRPEHSTNGPGEI
CSTDLELLTLEKEGGPTSSSSSSSPSSSSAGTQQARTTINVEIVQPSYVD
LELMSHQQELHFVSNALRHRVDGMMSRMLSDAEKKQRQKDEAGTIERRYL
LARAWKFVAQGLNKGLQDQNPDFNKHKEEVLPASWTVPVDGRPPPPTPEA
VVPGVEGVEVDDSICMVCFDGSSTENNEIVFCDGCNVAIHQACYGLPEVP
EGDFYCEKCLGLMENPERPIVCALCPEVHGGFKRTVDGKWVHLVCALVCP
GARITNLMDMGPVDLSGASAIIKRPSASSPLRHPPPPLVALQPPDLPQLT
PALLVAAATNEIAAQGMRTTTTATVEKEEISQEVTVIANSKGNRKANPCV
SASAAPSEGEDAGEGEKKEEDWGRSQQQQKQQQQHQLQQEEISLAAEQPS
FPATFAATCLTDETTTSTLDKQADDELNAVLTEAAAAIASSPRLSSPPLA
MTSSQKIAEKRSSPSPTPTSIARRSTRSSPAISGRVSRASSSCSVSTVQR
RPDGVPEEKASAAASEKEQREKMETDVASPAKREGKGEVPEVVMVEDGDG
RGVGGAALSSATQPPREAPHMEVETAAMTESFTPSTASSSALVVSAAPSP
KFALAPNPTHVRVDQCIICSQSRGHTLQCLHEGCRARFHLLCAWFRGAFV
SVDLTDRSFWGHGKNREDYPAGLHVRAYCLQHCPQGAHDRLEQVQLRAKY
RLKENDQHGPKRHHAYKKRAYTYGGMQGGKSLGGHQGLNPDSYHRYACAI
CMEPKAKLVESTDKVTIAAATTVVAQELGGGVEVGETKESAKGRPDSLKT
SAAKAAETAEGALIVCSRCDMSVHRTCYSYFQEPPTRTSSCQAEWLCQTC
VGEQQDLGSGGSCALCPRRGGLLVPTNDRNIRWVHAFCAEHNGPLVFKAG
RSPILSQLAAVDIRNVGKEAKKASKCGVCSRKNSGLCLRCAHPSCSVQFH
PLCAKLDGWYFEAEPRGEAPVVLCPGHVPHGVYRGLNGQYFDMKTTANLR
KNLDRARLIIDLVRKREKVKKALWKADCDLALNRLQKLRVLLEGRVLEMQ
NGRRLTEDRLAVYRKELGAIKARSVGAQEAEEEEALFKEADLDDRASAAA
AAITAAAAIEERKKRSLQGKATDGGEAGGAGTNKRPRPDLSLIPSGRPVR
RSRNTPQDQSAASSVCDTEADEAGGGGPLALAPVENVATSKRGGNTLAAA
STDSSAVSISSPQSSAAEVTIHVPAFPLSVKKYQKKVKAEKEKLSASSIA
STCPPLARGKAAAAGKSGDAATAQGKTEMEEAVEEEEEEEDALLARDRFE
ALTEERGMIAAEALGKTGSLLWAAAGTRVGACGRVDFEKSLGLIVDPEDL
RRREKRGQPPAPGRVVGDARISLDRQLLELVSALEDCKDGSGRDVSATFE
LSPDPETYPEYYDAVLHPMDLETLRHRVLTFFYLSMSDFCKDVQQIVRNA
KKFNAPRSQTYMDAEFLRTFFERKKAEVLEREKKALAALHHQERQEKQGM
WEGGADGDGRARRRRLGGGDGAADVGGFGGSGSVSGSMEAKQKGKRKAIA
GGGNRVKRNTRSMLKKERVCLVCSAGGDDSVPVVGQGPCHACAECVQQRP
EAFLGHQVDVLWPDDDMWYAGKIHDYDRLSGQHRIWYDDGEWEFVHLHEE
ELSYLVPVVFRPAKAASPANASEISLVPLVKSDAIPKGKVGGGRRGSAKK
EAPKEQGEEEKSEKEGGVKRKVQKARFEEADTSLGAAAKSSSGEGAEDVV
EIDAIGQEQEQEDEEETEDEM*
back to top
Synonyms
Publications