jgi.p|Nanoce1779_2|632397, gene_7648 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|632397
Unique Namegene_7648
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_20:496817..500317 +

Link to JBrowse

Properties
Property NameValue
TranscriptId632483
ProteinId632397
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:496817..500317 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005089Rho guanyl-nucleotide exchange factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0035023regulation of Rho protein signal transduction
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL034ncniL034Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G02490NO19G02490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632397mRNA_7648-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|632397mRNA_7648Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|632397

>mRNA_7648-protein ID=mRNA_7648-protein|Name=jgi.p|Nanoce1779_2|632397|organism=Nannochloropsis oceanica|type=polypeptide|length=703bp
MSDSTRQLLPLLRDLNVQELNRREKTVVYMYASEAKYLAYLRKALQVLVK
PLDDLAKGVTPTTGGGNDHAQGLFNTETSVVSQLTDGRKKGLLVKQQSKA
LETADMCCFLRIYPQLEILTEGIASALETRIRCAQEEDDWSSLCVGDIFL
GLKPLANTYASYAAVCEEATSILAQKEFTGYVNTISPGLLPLTLSQHLQA
PFAAMNRYQVQLQALLDETQPTHPDYEALKSAVILVEITMDKMNKTLQDT
RMYRRIRNIKDSIMVVGGRGTEVLNNLVSTDRRLLKEGLLLKACRAKNKQ
FMFWLFDNCLMYATPIGTLGGSKYQYQFNRIMMLSDCFLRESREDSRSFE
LLTGEKSFALWCDTVEQTKEWVRALRDAIQGAREAIGLKPGDMRDMVTAP
LWVQESDVTVCNVCQEAFGWAIMGGRQKHHCRSCGHVVCGPCSGYQMLLP
NIHKTRKQRACVVCFKGGKPVLELEDVSASIAMSANGSGGSNSSARSAAS
VEEHSPAVFVQPTQPPPRPLPILTKAKTAAASATTTPSVPVPRAVPPKKP
ARRSSAEAVAPGDSALQAKAGKAEEQQKRPQYSKNNFRPLSTRLSSSSSR
RSLALPLPSPAPSRNPPPPPSPPREPMASFMPVQKAEEEISGTKRVGGMV
NELVERMQLRRELLMTRGGEDFGEEGEQRATGSDSRMIRTRSSESDSDGW
DD*
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Synonyms
Publications