jgi.p|Nanoce1779_2|161641, gene_7621 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|161641
Unique Namegene_7621
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_20:395775..401803 -

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Properties
Property NameValue
TranscriptId161727
ProteinId161641
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:395775..401803 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL034ncniL034Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G02200NO19G02200Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|161641mRNA_7621-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|161641mRNA_7621Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|161641

>mRNA_7621-protein ID=mRNA_7621-protein|Name=jgi.p|Nanoce1779_2|161641|organism=Nannochloropsis oceanica|type=polypeptide|length=1225bp
MSSWFTLLAGVGGTGEGVEEGMEEGRGEVFPWSRVEEVIESAEGGKEGGK
EGGRGKRDEEEWKEGERVLDEEVALSKIGGGGEGKGVGGRGGGGGGGGGG
GGGEGGEGRERLGRGYNASLPPFFFHLTSQRQEQLQLKESPSHLTCRIFA
TSLNCGSCTRVQDLGRLDEWIPKDGYDLYVLAVQECRMLAQMRKAVHSHL
GGPSAFALFEQDLGDTLVCNGKIALLIFGRYDHVQEGALKLAAPGGRGRI
SSGIDLVFSRFHNKGVVGVALQYYGTAIAFLVAHFASDSGGKKRWERRDE
DARRTLHMLHLAGDERDFDVHLQHDHVILLGDLNYRSQCFVGEILCRLAA
SAEVEKSKQGWGLHSGHAWRDVSYNRFFMPPSQLRGMGRTARSPSQEIPV
EETEMEVLGEEEGERGREEGVGREMTWTTARGSGSEGGRKKEGLVGLLSS
TRGSACVREQAEEEAGKERGEERKEEHWNWVGEVDELSLSRKAEVALSGF
QEGPLTFPPTFKYHPKRSVEDYADVADLRYAYQVSKGGGEEGGEGREVGK
KESRTPSWTDRVLFHSLPGLEGRLVLEAYDACDAITGSDHRPVVAAFQLG
LEKPTMTAAPAAAAGEMLMGGGEEEGGGGIDNGKRLLWRRKIEAGGGGRG
QGRDANGLSVPPPISDRAAGKTLSWHGLPPVPPFPPPFPSSFPSIFSSSS
PSSSLSSSSSTNPLFLSSSRSTPAPFTPSFLPLLPPPPPRPPVIPTTILL
SVRLSNFRFHFKLPSKPDLQLAQRHPSSLPPPSLSSTSSTSSSFPSSAER
WLGPLASVATSWLKGRIRPGGKRGEGKGGGKWDREGGRGVGGEEEEEEEE
KQEEEEEEEEEEEEEDKEGKEEGVEGELFYTPARDNAGIKMEDLESGITL
SPSSPHPLTRGGGRRGGGGGLSEDEEGGGVPGRQIPAAASYAPSFSPMHS
SRISAPPLSSSSSYSSFSAEAEVETFQQQQQQQQESHHSSCPPATDARRT
TIPLPSPLIPTEADIGWVIVLMPIPCQDPLTAHRRVVLLDSLEASPAVPP
HPLSFSSSSPLLSLMNGGLRPAARTAANIARLQHLRKKEKEEEKKEKRER
KIMEVAARAEALAQTAAAAAATAAAAAAAAATAATTTAAAVGVKTVAPTA
RESGRWEDSERVSSKTASPQSPCVPSECTKRSGDDDEGEGEGEDVEEEEE
EEEEEEKERGEEREEEEEEEEEDH*
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Synonyms
Publications