jgi.p|Nanoce1779_2|599202, gene_7566 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|599202
Unique Namegene_7566
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_20:271669..276486 -

Link to JBrowse

Properties
Property NameValue
TranscriptId599288
ProteinId599202
Product namePOT family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:271669..276486 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006857oligopeptide transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL034ncniL034Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G01670NO19G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599202mRNA_7566-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|599202mRNA_7566Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|599202

>mRNA_7566-protein ID=mRNA_7566-protein|Name=jgi.p|Nanoce1779_2|599202|organism=Nannochloropsis oceanica|type=polypeptide|length=692bp
MDDEQTQVPLLLGEPVSDDGDDENAREAHEAITAVAGMMDTPHKPQFLQS
QILWRVCSFIVVTEFCERLSYYGVGGSLVLLFQSHLNYTNAQADNAYAIW
SGLCYCAPLVGGWLADSYLGRFKTIGVFSGIYLVGLLVLIIGVLPRNPTD
PIGGGAATRTTTEALVYIGIYTLALGDGGIKPNVSTFGADQFSQSAEGKR
AMESFFNSFYAAINCGALISFTLIVSITQYGLPWLGGTDYRFAVGFSIAA
LFTAGGIGIFWSGRRRYKMMPPTGSVLATSMAILFQAAGKSLRAWRVRQD
WIVSAGAAAAAGEEGNGSTCGSSSGDSGSCSSHLPVIAPSGDDSASSSWL
DQAKRSHGGSFAAVDVEGVKCVCRLLPFLFFLIPYWTCYTQMSTSFQNQG
CQMDLSLKPLLPSTKIAVSTLNLFDTLGIILLVPFFDRIVYPFFRRHGHP
LSQLRRFGAGFVFASLAMIAAGLLEIYRKSQAPSETSYPTNSTDTNTILF
LEQHISACKNIDDFNPFAYQAWFAAGGRSSSTTPPAACEQIGPSSSDGSL
PLSSILCQNVPLVSPVSVFWQVPQFVLIGISEILTSITSYAFFYAQAPPN
MRSFAASLNLLTTALGTWLCIPLVALANSGDVEWVPSDVNKGHLAGFFFL
LAGIMLSMTAGFMVQAKRYQPTVLMSVDGSGEFNSTVELEE*
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Synonyms
Publications