jgi.p|Nanoce1779_2|558625, gene_7525 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|558625
Unique Namegene_7525
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_20:175413..179899 +

Link to JBrowse

Properties
Property NameValue
TranscriptId558711
ProteinId558625
Product nameN2,N2-dimethylguanosine tRNA methyltransferase-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:175413..179899 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0004809tRNA (guanine-N2-)-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL034ncniL034Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO19G01310NO19G01310Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558625mRNA_7525-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|558625mRNA_7525Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|558625

>mRNA_7525-protein ID=mRNA_7525-protein|Name=jgi.p|Nanoce1779_2|558625|organism=Nannochloropsis oceanica|type=polypeptide|length=612bp
MLVSRFLACRIVTASAPSLSSRGLPTRSPSLLLLIPSAWRVRAFFSTMAD
PAPKSITKEVPKGFVLIKEGQASMLFPKENEVFYNKVQVLNRDLSIMMLR
LFAERRLRDKEAKRLKREGLTPEQITAQLADVDWTKKVAETAAEDGLVVL
DALAASGLRSIRYFKEVSGVKKVIVNDLEEAAVAQAHRNVAYNNVDPTRV
VPQQGNANLVMYQHMEGPNLAGKEQFDVIDLDPYGSAAPFMDAAVQAVAN
GGMLCVTCTDLAVLNGNHPEVCWGKYRSMPTKARYMHEMAVRIVLQALET
QANRYRRYIVPLLSVGIDFYLRVFVRVFTSPQEVKKASLKTSYVHQSLGC
GSFYLQPVGKFTGGAGNGNYQGSTGPTCPPVCPETGAGFRLGGPIWSAPM
HDMEWVMEALNRAEEQQEQEGEGETEGREEGAMPASAPLPTTERMIGLLT
AVSEELVDVPLHYTLQDMAGTLHCTCPRVDDVKAALLNAGYRVSNQHKEP
RAFKTDAPPEVMWDIFRCWVQKHPVGDRGKKENSMAAKILSKPPKLQANF
SLPPSLLTPKKKVKRYPPNPEAFWGPKSKAKGKKRKVVEVVGEEGGMERG
AMEGEEDKKEE*
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Synonyms
Publications