jgi.p|Nanoce1779_2|667750, gene_743 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|667750
Unique Namegene_743
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:331441..341444 +

Link to JBrowse

Properties
Property NameValue
TranscriptId667836
ProteinId667750
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:331441..341444 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004377GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL033ncniL033Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01620NO02G01620Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667750mRNA_743-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667750mRNA_743Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|667750

>mRNA_743-protein ID=mRNA_743-protein|Name=jgi.p|Nanoce1779_2|667750|organism=Nannochloropsis oceanica|type=polypeptide|length=1967bp
MFMKQATSDRLLGMLVTLATGAAILYIQHRIKVFVNRRKASGKGERSETK
KATDYGDPYFRARWGRKSSGNGGIFELVHHIGTCMCGRFGFRLLAPAELK
ALDCPGRVRYPHVFVPVSSFQPLADLRLLTLFSARGGGLASHNVVVHAFC
TSCGVPVFRASDGAIDTLVVNIECLRGESVKSLEVTYYEDLLGFPRDDVQ
EGVEGGGEGRPEQQQRAGSPTWGEGVGERGGGKGAWFGANAGGEGGGSRP
ADAATMSGSSSSDAGALVRATTAEWSRAGAGAEGGVCRWGGKMTSLVDAI
LPVRGLFAASGDGGLRGSSISSSNGCYGRPSSALMGRMGATSLLSHLLSR
ASLSTCPPSSSSRPLAIETCGHRGLGEEDDDDPCSGSNNSSSSDSRSPAW
PTAGASASMWHAWDESCEVRRERGGRGRGGGGWWAGSGSSHKTPATSTIT
GLSVPVPGGVGGVGRGGGGGDIGGGSFYHKGMGGASGWERQENDHEEEYE
GMAEKREEEEQHQQQQQHRAAITPPPSAAAAAAADSFSSPTTSTPLADTT
NLQQQQQEQAQQPSTLSSRSSSDGVTGSVGSVVSSKEEAEDIWLRGKHSQ
HSRDTTPIMDLVVANQRNDTKGLLRYFAEAHIKGQLSAEAFKEVEHLLLL
EQQHHQPQRSRINADKPYESGAASLSNMTQSPHALPFNSWGPIYIWDWFN
PDHLCPTMERVGRVGDGGKWMCGLETLRKRPEEVGRPCIVYAFGINDDTS
FEEELVNITHCQVFAFDPTVKNLPASALNATPPLHFYKQALGPRDAPSRN
FLIERNLLSIMKELGHTYIDVLKVDVEGAEWASFAPVFAAGPLPVGQLLI
ELHYQDVATTFDFFDQLEKQGFRAFSRETNYHPCVTGKMPVAIEYSFIQP
ATFPKGDALQASKAMLAGLPTYQRQNGVIYLLTQRTRVHSHLIAMLKGLD
KYFNAAPGRSYPIVIFHDDFTPADEAAVRAATSSPLTFHRIEFDIPAFLD
KEKIPERTECSKHSSTVGYRHMCRFLGLQVQHLLKHFEWHWRLDDDSLFL
SPIGYDPFTLMLQNGKKYGFNRILHDNENCVVGLWDVAKDFAKDRGISPT
FLDNWDDGVTFYNNFEISHRSIWTNPVVMDFMEHVDRLGGIYYVRWGDAP
IRSLAVALVVPETEVHYFSDIGYAHLPYHRQEPRPLPPPFAGALWYLDGA
SQYIRDVEENNRLDRMGALKRRRQHGVVVIFSTSERFEALKRCLASFEEK
FNKHRGYHVWVWSHGLTYEQRLELRALSSSPVRIDTMERPLHLTEGGENR
AATGSKGPCGPHDVNSTRLLGWEISRIIAKRYIWQWRLADNAFFTEDLID
DPFLTMVQSRATYGVAAFGTVPAMHRACVRQLVNTVTTRFAFEKKGREEL
LDTVESVYFDPSFEISHRALWEDPRWDSLIEIVETGGTAVSWEEKAPTPF
VGHVDGAYIRSLGVALHLQGGEGGLHIFDNLHAVDLSASVMISNRSNSNK
QQQEGETRRIAGHGLEVSHDSQVLGKLFRPQRLGFLDAMLGTPVSLPRNP
SSVTHGATPPAAAVVTNTPEMVWMLGETRIGHMNNTKPEAAFVLDDAVAL
LSPANKIIDYFWRHRENQGMPASILNDGTLGSDQTLLPTAGLAVVPERHP
DQVRLILLCQRQNVSASYIEGERTQLGSAVVVVTNAQMPPSRWVYDVRQF
PGTDKWNGWHTAMALTDGSLVSRNPTTDSVYIMGEQTTNVTTENSWYLKR
EHVVSKVPLVSLMRMSVEKMEIFATAAAVGAADEEVRNEGQWVSYAETVL
ETGSPAEAAERLRNHSKTLLPSEEGQAKALVMERVGLGYLSGPKLWFMGD
ILLDDDNGEEEGKRLVVKTSPAITGPWEDHTVMRLPSEYSTRQYICPSLY
VLPDMAQDQQWEVALGLACLVRGHGATPVQEGRSQLSAQVGPTTVDVFRV
RFKAPAEAVIDPIPTV*
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Synonyms
Publications