jgi.p|Nanoce1779_2|650628, gene_7225 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|650628
Unique Namegene_7225
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:630689..635719 +

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Properties
Property NameValue
TranscriptId650714
ProteinId650628
Product nameSodium/hydrogen exchanger family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:630689..635719 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015299solute:proton antiporter activity
GO:0015385sodium:proton antiporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
GO:0006885regulation of pH
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G02090NO22G02090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|650628mRNA_7225-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|650628mRNA_7225Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|650628

>mRNA_7225-protein ID=mRNA_7225-protein|Name=jgi.p|Nanoce1779_2|650628|organism=Nannochloropsis oceanica|type=polypeptide|length=617bp
MSTPTHAPAFICTDLIMATALAGAFVRLLFVIGDDAPAATKAAAEAAAAA
AANDAAMAPAPSVSHEFGALNTLLLVLVLGLCILSAYLVKAFKFYYLPES
AAAILVGLIVGGFARLFSPSKDELDFLSFRPELFFFLFLPPIIFEAGYTL
RKKQFFSNFWTILFYAVGGTLLSTFMVGGLTYGLGKMGIIPIDTHNPMEA
LCFGSLISAVDPVATLSIIGSPELHCNPLLYSLLFGESVLNDAVSIVLFH
TFSSYYSADVPFSGATLRAAISNFTVVSLGSIVAGVGMALACCYICRHTA
LRRSPKHEICLLFLFSYGSYAFAEAISLSGVMALFFCGVILSHYNSYNLS
KHSQIASETIFKALGVVAEYLVFLFMGTGFFTGRFRVWNVAFILCATASC
LLARAAHIFPISYLANLGRRQKITWNMQVAIWFSGLRGAIAFALAQNMPG
PHKDVYTTTTLCICILTTFVCGGLTEPMLETLGMKIKPGTTSCTDLEMPI
AHYNESRASPRGEGGDDTDAFPRRRTSTNGSYGPGMERPHRGIHKLWKNF
DTQYMKPVFGGNEEEEEEEEEEEEIYVCGGREEGRAGGREEKENLLVFST
ASEQEDEEIQVIREGD*
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Synonyms
Publications