jgi.p|Nanoce1779_2|573912, gene_720 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|573912
Unique Namegene_720
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:278763..282579 +

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Properties
Property NameValue
TranscriptId573998
ProteinId573912
Product namephosphoserine aminotransferase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:278763..282579 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004648O-phospho-L-serine:2-oxoglutarate aminotransferase activity
GO:0004617phosphoglycerate dehydrogenase activity
GO:0048037cofactor binding
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0051287NAD binding
GO:0016597amino acid binding
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006564L-serine biosynthetic process
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL033ncniL033Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01420NO02G01420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573912mRNA_720-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573912mRNA_720Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|573912

>mRNA_720-protein ID=mRNA_720-protein|Name=jgi.p|Nanoce1779_2|573912|organism=Nannochloropsis oceanica|type=polypeptide|length=963bp
MLSRTVTSLGVPGKAGALVARRHISYSQARLAKILLSDATDKVCAEQFRA
RGHDVDSKPGLSKEELKQIIGQYDALVVRSATKVTKDLLSAAINLKVVGR
AGTGVDNIDTPAATMQGVLVVNTPGGNTISTAELTFTHMLALSRNIPQAV
ASLKAGKWERNKYTGTELTGKTLAVIGLGRIGREVARWGRAFGMTTIGFD
PIVSAAAARAAGIEPFPLEEVWAKADFITLHTPLTKDTRHLINAETLKKC
KKGVRIVNCARGGIIDEGALLEALESGHVAGASLDVYESEPPTEKERPLV
IHPRVVSTPHLGANTKDAQVRVAKDIAIQLSDILEQKDFVGVVNAPNIDF
ARKSQLIPYLQLAEKVGSLQAQLIGTGKIKRINVTMQGKDVAVSEMSESI
KIAVLKGTLSHLLDQEVNFLNAGPLATDMGLSVNSVLVERQDTQFSNTIK
VEFEMDGFLNFSRSITGTVFGGSQLRIIEIDGFKTDIPPTGSVVFFNNLD
RPGALKAIAGVLSKNNCNISHFSLGRQTKEGKALGAITLDEPVPQNVLEE
IGTLPEISNCSQVQLLDMADKVFRIHQKSEPTYVAGDARPHVRPENPQFS
SGPTKKRPGYSYAALGTDCLGRSHRSKIGKAKLKLAIEESKRLLQLPEDY
RLGIVPASDTGAYEMAMWSMLGARPVDVFYWESFGKGWFTDAVSHLGLKE
SVGIQEHSADYGQLPDFTKYNPKHDALFTYNGTTSGARLKDTDWIPDERT
GLTFNDATSAAFAMPMAWPKLDVTTYSWQKVLGGEGGHGVIILSPRAVER
LENYKPKWPLPKIFRMTKKGKLDEALFEGSTINTPSMLAVEDYLDALAWA
DTVGGLDGLVSRSVKNYKVLEKFVSENEWISFLVKDPSIRSTTSVCLQLE
LSKEQVKAFTGLLEKEGVGLDMGSYRDAPPGLRIWCGATVDSEDLEALMP
WLSWAYAEVTKK*
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Synonyms
Publications