jgi.p|Nanoce1779_2|544253, gene_7168 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|544253
Unique Namegene_7168
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:437571..443433 +

Link to JBrowse

Properties
Property NameValue
TranscriptId544339
ProteinId544253
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:437571..443433 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0009345glycine-tRNA ligase complex
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004820glycine-tRNA ligase activity
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006426glycyl-tRNA aminoacylation
GO:0006412translation
GO:0006418tRNA aminoacylation for protein translation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01550NO22G01550Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|544253mRNA_7168-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|544253mRNA_7168Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|544253

>mRNA_7168-protein ID=mRNA_7168-protein|Name=jgi.p|Nanoce1779_2|544253|organism=Nannochloropsis oceanica|type=polypeptide|length=734bp
MTEPRTTHVAVDVDALAAAVTKQGGVVKTLKKEGAKPEVLEPEVAKLLAL
RAELDVARKAAEGTSTEKPFNRTAFDDLVKRKMFVVSAFEIHGGVGGLFD
LGPASCALKANILDVWRQHFVLEENMLEMECTCLTPEVVLKTSGHVDKFT
DLMVKDEVSGECHRADKLLEDFIDKFLETNPTMPRGEQEEHRRVQRQADA
YTPEELHALFQKYGINSPSTGNPLTFPFAFNLMFKTSIGPEGIATGYLRP
ETAQGLFVNFRRLLEYNSGRMPFAAAQIGLGFRNEISPRAGLLRVREFCM
AEIEHFVNPMDKKHLKFASLATTELVLFPNEDQLGSGKTKVMTIGDAVRE
GVVNNETLGYFMAKTWLFMLKIGMDGGRLRFRQHLKTEMAHYAADCWDLE
IKSSYGWVECVGHADRACYDLMVHSKKSKVPLVASYTLPEPREEEVWVMK
AEKAVIGKTFKQEQKKVMAALEALTEEGGEGVDQFQKRLEEEGSTILEGC
KIERGMVSWTKVKKMVQEVKYMPSVIEPSFGIGRVLYSLMEHSFTQRKAD
ENRCVMAFVPRVAPIKVGVYPLLNKPEFAPYTEKIVSLLTEAGLSNRSDT
TGVSVGRRYSRADEIGCPFGVTIDYETLSSQDVTVRERDSTAQIRVQIEQ
LVPLLAGLVEGSKSWEKDAMGRFPVVRMGDEDGEEEGGAEGGGNGSVTTG
AGALTIVEKTPRGRFSRPAEGAGLPDIGKLSVK*
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Synonyms
Publications