jgi.p|Nanoce1779_2|624570, gene_712 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|624570
Unique Namegene_712
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:254643..261246 -

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Properties
Property NameValue
TranscriptId624656
ProteinId624570
Product nameNAD(P) transhydrogenase beta subunit-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:254643..261246 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008746NAD(P)+ transhydrogenase activity
GO:0008750NAD(P)+ transhydrogenase (AB-specific) activity
GO:0050661NADP binding
GO:0016491oxidoreductase activity
Vocabulary: Cellular Component
TermDefinition
GO:0009276Gram-negative-bacterium-type cell wall
GO:0016021integral component of membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL033ncniL033Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01300NO02G01300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624570mRNA_712-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624570mRNA_712Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|624570

>mRNA_712-protein ID=mRNA_712-protein|Name=jgi.p|Nanoce1779_2|624570|organism=Nannochloropsis oceanica|type=polypeptide|length=1356bp
MTSTMTAARDVTKRRRGCHTSSRSHSITLLFPLCLLMTTDAFQLRSPSPN
STPRRSQLLSMSSPSSTNSRTTATISSVIITQETVTLSTGLPMEVLIAKP
PSSISSTIPPPFSAIFQPKTKSNNKPPLLFLHGSFHSSWCWSEHFLPFFS
IRGHDCYAISFRGTSRSPSPSQESCITITTHAADLRAFLKSTFPPSSLPP
IVIGHSFGGAILMKLLEQQQPSSPPLLSGAAFFCSVPPSGNGPMTGRFLK
RDLLLALKIVLGFVAKKAARWDWLCRELFFTPTLPPALLRRYRERLAQDS
VVGIDVKDFLKELPSLKADEKTGKGRWVGQVPHRLVIASPCSSSRSLALT
QHQRLAVLRALSSKAPAAAAAAAAAPLAGGANIDLKAGIAYTELTVGVPR
ETFPGECRVAGTPETVGKLVTQGMTVRVEKGAGERAGFTDAAYVKAGGVI
VDKAAVWKSHIITKVRPPSIEEGQSLGDRTLISMIQPAQNPELVDVFKKN
GATVLGLDQLPRTLSRGQAFDVLSSQANIAGYKAVLEAVGAFQRFVPGQI
TAAGRVQPAKVLVLGAGVAGLSAVQHAKNLGAIVRAFDVRPVVKEQVESL
GGEFVEVAHQEDGSGAGGYAKEMSAAWHEAARRALAEQCREVDIIIGTAL
IPGRAAPRLIHEDMVALLKPGSVVVDLAAESGGNIAGAKPNEVYKTENGI
TMIGHTDLPSRLPTTASTLFANNVSKFLLSIGPQTTKVKGVFQIDHSDEA
AEVLPEVVVDPKQAFVKNAMWTTMGAGSVVALGMAGPGEAFDSMLTTFAL
STMLGYHTVQGVAHSLHSPLMSVTNAISGTTALGGMILLAHGVHDGHLTA
QLLGAGATVISAVNIGGGFKVTGAMLDMFRRKDDAPEFNHLYAIPAGTLA
VGYLYGMHAGHGADMTPLVSLVSALCCVGGIGGLSSQTTARLGNVLGMSG
VGLGTLATLGSLHAPMPVIAGVIGLLAGGGLVGTKIAAKVGPAELPQTVA
AFHSLVGLAALGTAVGDAALYLGNPEIMDATRMSAIYLASVIGSVTATGS
VVAFGKLQGWIGSRALSLPGVGTAASAVGFGLAGSPEGALACLGAGSVLS
GALGAHMTASIGGADMPVVVTGFMLNSPLLTTVGALIGSSGAILTHIMCK
AMNRDIVSVLLGGGEAMKIEGEATMTDVGQTVELLTNSKKVVIVPGYGLA
VAKAQYAIAELVEKLHHHGIKTTFGIHPVAGRMPGQLNVLLAEAGVPYDV
VQEMDEINEHIHESDLCLVIGANDTVNSAAEEDPNSPLAGMPVIRAWESK
SVVVMKRSMASGYAGVENPLFVKPNTQMLLGDAKKTVDAILAATKEHYDK
ESGAI*
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Synonyms
Publications