jgi.p|Nanoce1779_2|625868, gene_7110 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|625868
Unique Namegene_7110
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:314527..319181 +

Link to JBrowse

Properties
Property NameValue
TranscriptId625954
ProteinId625868
Product nameNucleotide-sugar transporter-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:314527..319181 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004197cysteine-type endopeptidase activity
GO:0005351carbohydrate:proton symporter activity
GO:0005338nucleotide-sugar transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0000139Golgi membrane
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0008643carbohydrate transport
GO:0015780nucleotide-sugar transmembrane transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G01080NO22G01080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625868mRNA_7110-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625868mRNA_7110Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|625868

>mRNA_7110-protein ID=mRNA_7110-protein|Name=jgi.p|Nanoce1779_2|625868|organism=Nannochloropsis oceanica|type=polypeptide|length=406bp
MDVLFKDMKRADMLKYGALLVLVMQNSTLALTMRYSRSRGDVMYISSTAV
VMSEIVKLVAASCLIGIEEGSISGLWSKLYHEIVLMPADFAKLLIPASLY
TLQNNLAYIAVSNLDAASYQVLYQLKILTTAIFSVVLLRRRLDLSKWLSL
VVLVGGVSLVQVSGLKTGGTASEVAAATGNITIGLVSVILACCSSGFAGV
YFEKVLKGSEVSVWVRNVELALIGIIVGTVGVWYTDSAMVNEHGFFHGYT
SIVWAVIALQALGGIVVALVVKHADSLLKGFSTAISIVVSCLVSYTFFGE
VQLSPMFVIGVSLVIISTLMYSTNPVELCCSSTFYGGIMSSSKVNGSGGG
VVKMLNGGSDDDIKSDHISSGEEDERIAEEAVGIEGVRGVIGGAWGQPVR
RSLPV*
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Synonyms
Publications