jgi.p|Nanoce1779_2|101715, gene_7078 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|101715
Unique Namegene_7078
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:238960..244260 -

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Properties
Property NameValue
TranscriptId101801
ProteinId101715
Product nameGlycosyltransferase family 20-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:238960..244260 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005992trehalose biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00790NO22G00790Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|101715mRNA_7078-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|101715mRNA_7078Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|101715

>mRNA_7078-protein ID=mRNA_7078-protein|Name=jgi.p|Nanoce1779_2|101715|organism=Nannochloropsis oceanica|type=polypeptide|length=1410bp
MVKTRHFSRVQFQVEAPIGHGQSIYVTGNGPALGDNDALSGMALYTTPSE
YPRWSSDWVSVPTDSELTYKYAIFEGEAFSHWEPAGTGRHGTRTVKVKGD
QVILDVLGVLPSPRATPSPSSLPPITPRSAAAAALGAIAAGGGEGSGGGG
GVQWGDDTMIGGKDGRERRSLSSSGTRSVEEVVAAMRRFNFEDGMEGGEG
GEEGEEGQSNVVINRDDADATAQSLGDAPIDVTSITSQSTLVKHVSLRLG
REDSQKGGGRRGSKDGYPGHGGGGARTQTGGEGEGGAGGGGGGPGQAMAS
RRGRVGSASTAQAFLDPEEVSISSSDGVIVVSYFLPLIVTRAPGVDSSRS
QSGREGGAGGRRRRTVSAGGSGGNAVEGADEEEEEEMDEEREEGSEAHDW
IITWDTENLLSLRTRLRVTWVGTVRLPEGSGGALCREEQESLARALRKFD
CVPVFVAPDMHEKFYTTFCKGTLWPVFHHILDVYGPKPTRFWDQKTQDSV
WHSYSHVNMRFRDKVVEVYNEGDLIWIHGFHLLVLPSFITKSLPTAKTGL
FLHTPFPSSEIFRTLSVREDLLRGMLNADHIGFHLFEYARHFVTCVRRIL
GVTYDMEGGQMAVHYNGRTVSISSIHVGVDSAALRHLMVAEPQVGLEVER
LREQFEGRKVVLGIDRLERIRGIPLKLLAFERFLEKYPEWRSKVVLFQVG
ITANERGDDYARTKREVQGLVRSINAANADLASPVVVFIERDETQMRLPN
RMPLLAMADIFIVTSPRDGLNRMPLEFVAAQAAMMGGKEGGSTVGSASSS
RKSSQVDLATVGEQQQQQQQRQAQSLQYQDQGDEEPVVLPSPGVLILSEF
VSCTRVLLGAMFVNPWKIAHTAELIARALGMSREERQARHARDLKFVNSQ
TVLQWAYQILMDVKRVKKDVDRSFYSGVGLGLHYRVLGMDKGFHPLRVED
VARAYRQSQHRVIMLDYGGTLVSGSEKKENVQYYAVSNKLVHRKGPSKHL
LSTLRDLCGDFKNACFVVTGMERAALEQGFGEVDNLGLGAEHGFFYKMPH
DHHPPGASSSSSSSGTTTSPANPPALPTSNMSSSSSVGTREGREGGKEGG
WEMMLPSFDSSWMELARAIMDVYVKRTHGTYIEQKGSALLWQYRDADPEF
GHMQSKELEDHLSGVLRGAAVEILRGENNALQGGYLEVRPEGVHKGSFLE
RVLGRMAEHGKMVDFLLVVGDDASDESMFTAATEYASSFPPRMVNAFSCT
VGKKPSQARSFLNDVDEVHGLLGSIARCSRVTRPNSRGFMSSVDLRELVA
GGVGGGGEGRGVGGEGPERGEAGPAGPRPMLMKSLTDSSVGYGAMKKNFS
LGDLAGGCGGGGGRKGERGFGGLAQPISGPFPSPSAAAMTWATYVETIKE
GNEDDGVFF*
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Synonyms
Publications