jgi.p|Nanoce1779_2|672077, gene_7060 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672077
Unique Namegene_7060
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_16:185319..193759 +

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Properties
Property NameValue
TranscriptId672163
ProteinId672077
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:185319..193759 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0008270zinc ion binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL025ncniL025Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO22G00610NO22G00610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672077mRNA_7060-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672077mRNA_7060Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|672077

>mRNA_7060-protein ID=mRNA_7060-protein|Name=jgi.p|Nanoce1779_2|672077|organism=Nannochloropsis oceanica|type=polypeptide|length=1964bp
MRTAGSAVPPPVLLLDVDGTLYSPLATGLERAIVTNIHTYCQRIYNLSPS
DCDALHIQYGSTIEGLRTTRALSNDDLAAFYHNLLHAHRGPIYITSNSPL
PHVLATLAHLGLASFPWAGILTPDSLPDFPTKSNPVYWASLLEKYPPASP
PDSASTPSSLPPPPRLVLLDDSVHNLRAATSLGIRGILVNNDHEGRKEGG
YAFDRALAAAIGAIDPTWTFDDIYYLRAKNDVDRRSLHRPTLARLEAELT
ALRLSLTTAAPPSPPTSPSLDDSGSFQNFQNMPPPSPPPSPHPSPRPTLP
ALRVHDLGAGLLSMLGPVLKMAGNAGFVAVDYKACELNPRVFEAVRRKLV
KEEGFEVREGGGGEGGGEKGGSETSKRHVSEGRRGWGHGGQVVLVRGARE
GGKEGERLPAVRVRLRVEDFGASVKEEQGEGGGREVGRQRPHLVVGCCLA
DLYRPREFVSRLLRACAGGGGREGGSEGGREGVDPLVYLPITFAGQTALT
PGAPAQDLPSSHPSSLPSSLPSDVEAMEAYHTSLVETQGHNLSPSLLIDA
MERHGAVLLSQGASPWRVERERDSYLWECLVYFFGLGLLSSSSLPSSSSS
GGGKVGWDLGAWRRRVMERRPVIEVGNVDLLFRLSKGGGREGRKEDEETL
TNVYVEFVGPREVVCREEGWKEEGALDATEVEVESICSLISSGTELKVYR
GDFPGGVGEDEGEEGEEMDVSIKGMKGEKMAYPLRYGYSLVGRVKRCGKG
VKEKRKLLGLEGRGEGPEGRGPLVFVFAAHASRVIVDESAVMVVPPGIAP
EDAVYLPSVETALSLVQDARPVIGETINVIGAGLIGLLVLSILGKVPFWG
NLRAVDPLEYRRALAKKVGASVTVAPAELGKEGERKVVEGEVEEEEEEME
KADTSIEVSGVAAGLQTAIDHTRYGGKVVVGSWYGNHAASNPAKLRLGLG
FHRSHLKLCLSQVSRISTELLDKWTKKRRFGTAWRLVKELKPSRVLTTRV
VAPQKWSSLPHRSHELYSASEDGTVKYGNIAVGFGKTIGLWDRRSSGGLV
VGGRGSGSFSSSSSSNNGSSNGSIEAARRGGEEGQQYHHDGWITDLIAVV
GAGGPPLLFSSALDGTIKIWDLRRGLEGGREGGGCLTTGQARREDEGVAS
LQLHSNDTGLLVGCEGSRLYDVDLPAVTRLSQPLWDLAPPSLASSSSSSS
ALVTRVYEGGGMNRYNLKRSQRSEDGRYVLRGNDEGRVCVWEGGREGGSK
ENVEMGRGEGGREGGVVPVLASWGGKRGDRRVRFLEEGREGMRGGGEPLL
SCVMSRTAPWVQVAFSSDMEMWVCSRGRKGRRVGEVEEEEEEEAEFLDDV
LAEEAGREEHGGGEEGEEEEDEDGFDEDGMEDEGGVEGGRRGGQAWEADR
LGLGELECSYGKGYVTQLVYVCETCVENTRKRRLQQQQQQQQQEGTSRLP
FTQSTPQEGVREEEEGKEEDVHGMCVSCAEQCHGVLGHRVRNIGEKAAFR
CDCGNDRFAHAGRLGGRLACTLCPATSLLSPSSMLFSSAGAAAGATAGAT
AGATAEATADAGGGGGGGGGGTATVIRLSTNDGDGGGDIGRDGGKASWNP
LNRYNHNFFDRWCYCNGEEELPMVQCVGCKDWFHQTGGCIHDGYDFSMDE
FDQEDYVCETCLNTPDLAFLQDYPSHSLLDRPVWQHRGGEGGREGGAEEG
GAAVPAEGTTAGAAGATVSETRMPTVASPFAAAAAAAVFYSAEAPNPSIP
TAATAAAAATAARTVLEEEATEGKEERRKYAMEREGEEEQNENGRKEEDQ
KAREDEKEEEEEVICLEPSLLASVGTAAAAAAVEKVEGKDHGWKSPPVGM
LEELEEEEGKGGGRAEGGEETSDAAFSSLYSSQPLETVAAYEEAIKAALA
AGDEARAFRLAMAMMVKKVSEQTSGTRRSIILAGDVERAAREMRGDRGGG
GAGGGGRGEGDGD*
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Synonyms
Publications