jgi.p|Nanoce1779_2|557968, gene_6982 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|557968
Unique Namegene_6982
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:612287..615627 -

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Properties
Property NameValue
TranscriptId558054
ProteinId557968
Product nameCleft lip and palate transmembrane protein 1 (CLPTM1)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:612287..615627 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G00330NO13G00330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557968mRNA_6982-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|557968mRNA_6982Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|557968

>mRNA_6982-protein ID=mRNA_6982-protein|Name=jgi.p|Nanoce1779_2|557968|organism=Nannochloropsis oceanica|type=polypeptide|length=458bp
MDIDPTSGYLTPVIYLNDFWLLSEHLIPLNESVAVVPLSLKYEPVGFFKW
QMQTQLDQQWKAQASSPFSTSAGDSEEDINKEGETVKRMFLETNPILLVI
TLIVSALHMLFDMLAFKNDVAFWKENKSLEGLSLRTIVINTFFQCVIFLY
LLDNDTSWMVLFSSGMGLLIEIWKVQKGMLTSLRWTDPATGARFWIPRLT
FSAVESYTQNKTQEYDSEATAHLLYVVAPLMVGYAAYSLFQEEHKGWYSW
AITSLTGFVYVFGFVMMTPQLYINYKLKSVAHLPWRTMVYKALNTFIDDL
FAFVIKMPTMHRLSCFRDDVIFFIMLYQRYIYPVDRARVNEFGQLTQDNK
ESEDARALLAAAAAAGAAPAAGGKGEGEEGGREEGRASGRALAASTLASL
RVDDDGNEGKEEEPQREDEQEEEWGQEVAVAHQAVHEDVEEEHEGRKEEG
EEEKEGE*
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Synonyms
Publications