jgi.p|Nanoce1779_2|651141, gene_6915 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|651141
Unique Namegene_6915
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:416620..422545 -

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Properties
Property NameValue
TranscriptId651227
ProteinId651141
Product nameSpc97 / Spc98 family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:416620..422545 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G00950NO13G00950Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|651141mRNA_6915-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|651141mRNA_6915Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|651141

>mRNA_6915-protein ID=mRNA_6915-protein|Name=jgi.p|Nanoce1779_2|651141|organism=Nannochloropsis oceanica|type=polypeptide|length=1904bp
MGAGGDTQNGRGVAACVASCDVPTLLRELEARLLTEAEASAHDRSTPTAL
PPLGSLLSYAILLRHGKADIGVDEGATMTTTMQRINACGVAMRRERRFEA
AEALELLVSWILRTEQEGSINRKNEERQQPFPALATLTVLSLLVPNPEAA
TEDFVFSPPSFPPSLPLPLGQLATGLLTRTLQACTAPDAVLRAEHRTKQG
DVPWVPLAAISAAVSTQEEEEEEKEGQQQWERQRQDEVGRCVVFGERTLL
DGIDDAGNVGLCGATLYPPHVFESQCHTEARVDTSTSPYFPSSLPSSCTS
SVLLESQPPDVTMFSALRPRRGLQRHVASHLRDMSLRLTIPALTDREARD
PTNDTLKMWARMRAKREMEPPSRANEEDRYSSEQGASSSSSSSSSSSSSF
WRRRRPAPNPPPPHQQRHHHHHDRLWQQQQQQRGQQQSLGWESSWGPTWG
QQVIPSTPLLLSQESSPAFETALLLHNTSLHHQHLLTAAEASVDTRGDGT
RIFPLLEAERTLVGHVFHALNGLPSSSFILHKKRGVRGFSFFSPSSSHPS
PHSSSPSSSLSYCLVPREGRRVSGRSARSVGQVLQVFAEAGTCVVRLEAL
ISYAREQKKSSSSENNRDRQRRKEGREGGRTGQVMQAFVNALSAHLVSFQ
TVVEEAREEVMRSSSGNGSLLQVLTATKHLRAHLGFLATLCHCFPSSLSR
RKEEEGIEEGIEEWSPASCLASLPQTSTDLLSFLYRRTLEAQAGGGGSPS
FPSSSSSSIRASERAVLLSLLEAAAAPYFTLLGKWIYTGSLSLLDDPFFE
FSVRVKEGGREGGRGDDGSDFLTSAFEEHVGEEEGEGGREGGKRSPSFLS
GPLAGRIVMAGKLLHLLSHMAARGGREGGESYYKRCAMEVPLRLGLVRNL
EGGGRRERWMEAEDSFMGSGLEVVSEEQDEEEWEGGKETSMKVREIKVVK
EGGGTEGRRVRRELEERVEKHQAIARVKEKEYREALKEQMQGQKEERMRR
IRERRGEGEGRKEGKSYGDRQAEKENIDSGRGAFIMMTPGVKTQEKSCHT
HPSSSSSTSSASSFSQYPSSGKGAVGEPGGGNSSGMAAVLNHEEKREGGR
EGRMEGGREDLFQALVTEEMAEEEGVEDGEGDKATSPTTAAATAATTAAA
AAAAAAGDSPEGVAIVTTPLGGRRGRAEAEAAAAVAAVAAAPKEEEEEEE
EEEEEEEEEGEKSSTARSIFEDTAPTHCNALTSTEAAAAATGISSEVNGL
KEGGEGSTFPGKRITHAWEGTSRCLSSFLWGNQMKVEGKEEGEKEGGKKG
EEEDRLMTLQARIDLEMVRKKMEEEEEEKEGEGRGERGWGDPRAMFSRVA
GDDLLDGGFGLGQGGREGGYVRQDEVEEEGGSSMRVVQRRDGRKEVVEEE
RGIDDTRPDGAQELQRPIRSTAHKRSSSSSSSSSSSINRCSRNHNTDKSL
STQSLQIPALEKTLHRQCDLVERATIAFFFHQAGLQGHILALRRFLLGAE
CALLKEFISLFHARVSEGMGEKGREGRRVDWSRPSNVLACYKDAVAAVGM
EDDPCLPCFTYVLRQTSIGGGGGRRIGGKEGERGGGELRLLDGIEPQYLP
PWPLGVVLPQMTLRKYGYVHRLLLKLHWLIHQVQRCRETVRAAAKYAASS
SSSSKPQAQQQQQQHEQHVILRGSCVLLHRLSALATLLLEHVAAQIDGDC
WQALQSTLGSFLPSLSPSSGDMMEDEGRREGGRKGSITVQQLKEIHADYV
GEMAARCFVDDAEEERGEGEQKKDGVGEGLPSLQWEIEQLMSLISDACGL
VESGVLLLLRQPPPPQQQQQQQQQYLGHTLSEVRLRLTAQLSCLGKCLRQ
RGVEEARRSFEKDTRGGGWGGKGVGRRGSEYCGYLLSRVEDMLEAERRCG
QEE*
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Synonyms
Publications