jgi.p|Nanoce1779_2|596626, gene_6874 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|596626
Unique Namegene_6874
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:310461..319222 +

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Properties
Property NameValue
TranscriptId596712
ProteinId596626
Product nameProtein of unknown function (DUF3595)-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:310461..319222 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01350NO13G01350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596626mRNA_6874-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596626mRNA_6874Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|596626

>mRNA_6874-protein ID=mRNA_6874-protein|Name=jgi.p|Nanoce1779_2|596626|organism=Nannochloropsis oceanica|type=polypeptide|length=2513bp
MRTFQPWSVATSTASFVTSTQDELFFSTKMGSMCSIDENSTADDDAGTAP
TTTSSSDSQLFAQWLVAKYGLYLCTLVYIILALQRPTVLGFVFMAIVMVG
AVLPDFVFRACAPALLVYTSGYAAAVYWFGSVAIRNNYFGADADKLLKPI
GLVIVDPFLNGWLVAGIPLCMVTLLGFTWRYRENKTTVTSAAAASVPSVR
SPAAVPPEENPPLREWVLYLENYLVAHNVGLYICLNLCFAVGVSHIEIWH
FPFIFAAAIIVVFPITAPYLWILVVGYAQSFILYQYWRHFHSRTDFGISD
MVLPVIFFVFACRQFLVYTQKFRMSWGAGINTAASSPRGPRPTSRQIRAV
MSVNGALYVTKIVLRLVLLGVIWHLAFHSPLTVFSIGYMILLAIMPLAFV
VSDSYRTISRHVFPRLFRAMAVYAGIVLCLVHIFCADGLTGISLDDFIGG
RLRDGNAPEEKSRAKSFMALNWVVQFLAVTQTEILRRQGVNLRQQFSRSP
LLVHALKQVLPFALAIVTFSFTWEYISLFGLLVLYLGILSAVAGRKVTIM
WRLTVVVSLLVALAIAIFDFRYFESYSFIPALYWVGFRRGEYVPNPDVSR
KSAVPKAAKGWVLSPSAEAYLVIAFLAALQFFYTMPGPEDADDESPARLG
CKQQMTGDTASARAAPAGAGDLTPTSKDVTPKGNDADSDEAVIDNLPVLA
LGVTSIIKLLRGAVSAPPVAVPALTSFSGTKSADVDATRSSAPSPSAGAE
QKAATSCRACPLPHSLHQVLGRLLINLYRSLVALFLMIMSTCIEFSFEFC
VIWAVIAALFHADLVSLLYLGFFVVLVSLPRSVLRYWWRVVVHALVFLVL
AEYMFILRLPPDLVSVPRAGSAAGEFLGTRQCSIFAQYMNTMGEVTPYSY
GQWFGLCITDDLLVVIDFVMLMLAIVQNKRFKADAWKTLRIDKPLFAILI
LAKPNSERPPDADATTNGLSVGRILVLQYTGYVIMLTVVIMSTLTFNITS
LGYLLLVALMVQTHAQEGLLTVRRYMWTLLAAYAWLCLTLRIMYQIPGWP
TSWSTGSGPVLLGLRKVYSSAHSNAEYPPEMIFDTVILILIVIQRRIFLS
PDFQKVLDELWYAEQYVHVAHGCHVVNQLEKIREDAMVRIRTQIKTMYEQ
LDTVARTRMAQAGDKFWEDYLFKNRNAATFSSGQYIGGSTDGSVDADPDK
DDDSNEGDQASQPLLLRKHKAEIREDASTLVSLCRELSVATSEQDSLLSG
AQELERAGSDRPTTASSSVSSRTSHTRRSASSPSLPIAGTRRRPGTIGTI
GMSLADNSMGQPLMSGEGRTGDRTTRTGTHMDPSLSLITPIAYASSSGRI
MSHKAEDHENGSEGCDQHAYSSGPEPTTIISTLLEAVNQTDFMSMRDPLQ
ITKEDLEDAVAANVAMARARTPTMLLDAPTAEQRMSPVSGMGQCRMTTFL
MPDLVDMGEEQDTDITTSQSQRATQQSYTSPLARGSSAMSISSLASSPLP
QSAPLSPSPLSSSTQASSDGISIPSRWGSENVALGSRLERLVMRSFEELK
QKESERDIHKANEGDYSAVDMCERLQKLGLKLLQNMVRLFNSRSTSLVYF
VLVMAHMYEPSLLSLIYPVSVFGYALLQNPRSLPRISGSLIHPMIQNPPR
HFWHFLLAYSFAMLVMKFVYQFPFFCMCGNNYSHGSQCPSALVAFQDVCE
ARSYPHLDYFVDQPIVRDYFLGIFKVYKALRWNWLSVRYEPVNHFVPAEP
PGMTSGAMLDSGLWGSFLISFLGDFLVLLAVLWHTHVLKIRGVWLSRDPE
FISRDGKGEVMSSSPLKRDENGARRDRGNEDADQEVSTLKREGQAATDDV
GSSAVEMKTPASPATPLTRQPSVAFRTCWPFSHLRTKPGCDLYVSLFFIQ
CTLFLFVLLAYQHADQLFQSVRENQLSGGFIVVLLLHFVLIVADRCLYLH
RSIKGKFILQMILIFSTYAVLHSNFTFRIGINQHGPVFVWYLIMCLYLFV
SALQISYGYPPFIQTNWMTKRAHHFWGNIFRLYRALPFLYELRMLLDWTC
TPTTLYLWEWIKLEDIYAGIFITECNLDFMRFENRKKGDKQPARRKWLCG
FLFFALLNLLIWLPLFVFSTGSLSEFGNHVKMASLSVQLNGFPMLYEAAS
ADYISPLLPPETWSSLAQVNPALALLPATSTNDYMHELQFVRLPRSSQEL
WKISPPAEADLLIVLEGRADMPTDSVSATNNQVEMTLQFAFGTQDGSVNQ
GGLVHPLAQEEKQQLTEIIRGTRTSLRLQAILPSVIRILATKEVTPLIST
GDILADCMLAFTRLGDDSTAGTEADPTSVLDGRNITTAVTGWWDFTCGNE
AAGGCASPLDPRGQDAATVPLNLETGEPEPGCNPSVYTISSEKTIGSYFA
ITYGIIGLYFTVVFTIGRFVHMSVMNKKYAILYDDLPRVEVLKELCETIY
LARMYKNLALEEELYRELIDIYRRPESGIFQRTGPYRHWLREADEDKSDY
DRIVQEGLEKYR*
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Synonyms
Publications