jgi.p|Nanoce1779_2|672293, gene_6847 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672293
Unique Namegene_6847
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:246430..254863 -

Link to JBrowse

Properties
Property NameValue
TranscriptId672379
ProteinId672293
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:246430..254863 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G01610NO13G01610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672293mRNA_6847-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672293mRNA_6847Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|672293

>mRNA_6847-protein ID=mRNA_6847-protein|Name=jgi.p|Nanoce1779_2|672293|organism=Nannochloropsis oceanica|type=polypeptide|length=1643bp
MDPNTKDACIKIVAGLKRTQRTFASSKDLLVGLIAYVDRVENPYDLVMAD
RALKGGEITSPFALVRLLRRPASNCLRFCIEEGNASYRIKARKLLDAIDK
DMREQPWLGVPPLPTETYTCLDLLEALVIHNPELRMFWARIETSLMDPSL
RAEYVQAVAFPMDMGRLTSEVLEDGISPSEFLAKAEAVFKNCVEFWTIQG
DMAMVAVGERGLGLLEEVAGRLLPEAWRERRLPFHDDAHPPPGKVALLPK
DNKLSLTRLATTNVPGLGSYGGGTGGEQQQPQQQLPVLSLAPFGKGGGGG
GELPRLKSISSAAAVPSLGPLFLSTGMPRLLSISTKDDGEGEKGGREAGG
GGAKKLQLKRSLSADPRGPSSSPQSKEGGGSSSSMSILSSSEERLSTSKS
SSTAGIGVGVGGPRLKIVTGGGSMGSSSIGSSNLSVRTALSGQDHTGLVL
APPEESSNSSSSIPVLSVVGSGGGGDGGGGGGQPILSSSPKLSVAVKPRG
GGLELSPPSSSFSTSAASPLAKLSVRSESSPSGGGGGGGGGGGGRGVVTL
KQPALGVFNKSPGGQKRKLGEEDVVGGGVEDDECMPLSATAAAMAAAATA
KMKKMRVKGEGEESGGVRGLTVATAGTAAGAAGLNRPPTLGGGTFRLKIA
PTPAAASTAASPPLLTVAPPPTSSPSFPMMRVESGNDGSDVFVRGRPGKP
KKKERSPLNKRKGGRVVDGAGVGVGVGGGRGGVGSSKKKKSGGFGSPRGG
GGGGGGGEGGPEGPEWEMDCARFLDKIIKLVQALGQTPGKSSKKAGGGMG
SRYNFDKPVVVSYPQIADIYLAKIQKPMDTSTVRMQLRGHSYGSPKAFLG
DVDLIFRNAIEFNDGARTPYEQEVVAVSRYVRRHLRRLALESLPLLDDDE
EEDEEKKEGEGRLTLTVKRREEVRKRVQEKASRQLATNGGGEGGVGKFAY
QEMRELIGQLKKEKRVGDFFTDEVNRSENAHYYRVIARPICFRDILKGLD
SGEGGVRVGQVVEDIRLIYKNALQFNSVTEAIIPISKMICEAARLLQRKL
DEKLPLVYLRIAENVERQAELKDQLKALRAEDERQRRANMAAAALTAGQP
HLDLGRGGGGGGEGGRMSVQGSPSGDGSRGGEVSFALSSSLKGASPLPGK
EGAMNQFLTPTAAAAAAAAAAAAAAAVGGGGGPTSGGPPLSGPISTNKLR
KEKRKEAELDRKQEERRRKEREGKLKESITQEVWAKVQKEKERTLVLQIQ
QQREKVEREKEQQMQQRQQDQQTAAKTEDKEGKETEMKEEEEEEGAVPAA
EEEERLLVSAFGCFDLSQLGSHANSISSSSGRNRRCGTAARPVRRLLAEL
LKSNGSSSSSSSSSSSEDGCEEGDGNKVAVMELEAQLASVPPADAADPAG
SAAAAAAAVAVGLEREENRRSDDEVEEKKDTEEDENEDDEGYFSSSGEEQ
EEAVDTASWEVEDGSAGGVRRVRLLVRVVELPFWMGEEGGRGVETKSPLA
SNALVHVTVVADAEESGEGEEEGRGGVGGMRRSRRVKLQSQRPLGLEVNG
GEKRVLLKGERRKVHAKDAEAAVAVKLGGNVDEEDYEGGKVFVAHLVFPV
STGALYVGGYRVRHPAFLRRHKAAVAAEDEVMMLRELLTCQL*
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Synonyms
Publications