jgi.p|Nanoce1779_2|596314, gene_6787 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|596314
Unique Namegene_6787
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_17:96729..98236 +

Link to JBrowse

Properties
Property NameValue
TranscriptId596400
ProteinId596314
Product namefructose-1,6-bisphosphatase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:96729..98236 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0042132fructose 1,6-bisphosphate 1-phosphatase activity
GO:0042578phosphoric ester hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL026ncniL026Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G02250NO13G02250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596314mRNA_6787-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596314mRNA_6787Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|596314

>mRNA_6787-protein ID=mRNA_6787-protein|Name=jgi.p|Nanoce1779_2|596314|organism=Nannochloropsis oceanica|type=polypeptide|length=456bp
MQYAAHPLFDHRNHLPRLRMTTTTIMPAAVAATPARKRRKLHQNPLAALS
SLHALLLLGLAWLECRAFVIPRPTSSPSLVLSLTLPRQHRPRQLRMIMDE
PKVGEEPSVMSQALSKQKTLSRYVEVETWKHRELTDLQPVMRGIESACRG
IATLVRRAQCDEIAGLHGNDGDMNVQGEVQKVMDVLANNILAASMCAPGK
MDYVASEEEEEPTYCSAVLQNAAFQGEYAGVFDPLDGSSNIEAGLPVGTI
FGIYRRPQLNLSPERERDPLEAIMQPGSKLLASGYCLYGGQTILVLTLGQ
GVHGFTLNKPGGDFILTQPNMRIPARGQLYAINEGSSHLWEPKVTEYVRR
LKLGEGEGNVPHRTAYVGAMVADVHRVLVEGGVYAYPGTVDAPNGKIRLL
YEANPMSMLVEQAGGLSTTGRQRILDLKPTGIHQRVPIFIGSKEDIKDLQ
ALLKD*
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Synonyms
Publications