jgi.p|Nanoce1779_2|672528, gene_6658 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|672528
Unique Name	gene_6658
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Alignment location	scaffold_18:375708..379254 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	672614
ProteinId	672528
Product name	Peptidase family U32-domain containing protein
Portal id	Nanoce1779_2

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_18	supercontig	scaffold_18:375708..379254 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE164714	2022-03-15
GO annotation for N. oceanica CCMP1779 v2	2020-03-30
PRJNA285666	2019-07-03
PRJNA157867	2019-07-02
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0008233	peptidase activity

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniL029	ncniL029	Nannochloropsis oceanica (N. oceanica CCMP1779)	syntenic_region
ncniL028	ncniL028	Nannochloropsis oceanica (N. oceanica CCMP1779)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G03350	NO06G03350	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|672528	mRNA_6658-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|672528	mRNA_6658	Nannochloropsis oceanica (N. oceanica CCMP1779)	mRNA

Sequences

The following sequences are available for this feature:

protein sequence

protein sequence of jgi.p|Nanoce1779_2|672528

>mRNA_6658-protein ID=mRNA_6658-protein|Name=jgi.p|Nanoce1779_2|672528|organism=Nannochloropsis oceanica|type=polypeptide|length=1099bp
MVPPPRPSFSFEIPQSKGICLLLPLLLLQFLLMATTQAFIVLPPGSPTAF
MRSSPAVHLMATTTAATSTRLMKGVRPTAPSEPLIPPPIPTHPVPQILAP
AGGREQFLAALNSGADQVFLGLKSFNARARAENFGVEDLRNMVPLAHRYG
MKVLVTVNVLIKENEFSALLDVLSALEELEVDAIIVQDQAVGTIVQQFFP
TLTMHASTQMAVHNLQGVIKAAALGYRRVVLARELTAKEMKDIRAGVKAD
VTQLEAFAHGSLCYSYSGLCLFSGETDARSGNRGECSYSCREPYKLTSED
GMGFLFSMADLDTSHDLDLLAEAGIDTLKIEGRKKDAQYVASSVAMYRRR
LDQLYQRPTLRPLAPPEAQQTVNSSSVRPEAFLRQDLSLSFHRGTTSFFV
RGRYHENVIDLNNAGHLGVPAGRVSYVSKDGKTFRFTPEVDLERYDGIKI
TPPSRAFHSTPQHGSLSSFSPEEGTAPGTATTAAAAHTKLLHEKYANDLP
EFSLRNFKVQGSKAFNAMAGAVVDVEIPIEIRRSWEQQPDRFRMINRGDV
VFQSRSNELKRRVEALTTVPDGYKSREWRKVDVGVEVRREGGREGEAGGL
ELCVKVSKLGQVLVEDKLVWQSFEYSMKKTKEGVIADIVEVLGTYGELGF
RADAVVIDGLDDGQDEGAREGGKGGKGVPFIRRKDLKVLKAKVAETLTGA
YEAFVRGRKQRAVAGLGISEKSSSSSSSSSSSSAAAPVVPLPARMWDERR
FAIKFDRPEYLDMLDLYLSSMTGREGGRESTVVKEVVFEPKRMYLADVKP
EDGVARLMAFGARHGVRVRLALPTVVRAWDMTPLKGWVEAFVAAHAQQQQ
QQQQQRTPPVCFEVGNLGAWGLLEEWGVLSSSSPPAASSPRVDVTTDFTL
YSLNSQASAMWARTLGASRIALSVEDDKENLKAHMQAWLRAMNAAGAGAG
AGAGAAGTSAAVGDECLASIAPQYILYKDVPLFMAEACSLTALHGNSCPG
SKVCGYRTLSIENEQGEKFEVAHEHCKSIVYSTKAQSLVHRQKDLLGFGV
RDFRLDFLTRKYDKKQFFEVLDAALRREEGDEEALPNTHVANFDRKLL*

Synonyms

Publications