jgi.p|Nanoce1779_2|597470, gene_6606 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|597470
Unique Namegene_6606
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:257465..264257 -

Link to JBrowse

Properties
Property NameValue
TranscriptId597556
ProteinId597470
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:257465..264257 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02800NO06G02800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597470mRNA_6606-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|597470mRNA_6606Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|597470

>mRNA_6606-protein ID=mRNA_6606-protein|Name=jgi.p|Nanoce1779_2|597470|organism=Nannochloropsis oceanica|type=polypeptide|length=1918bp
MAGGWSIFWRQFSVLTWKNNILRRKSWKSSMIEILVPVALIFGMLAIYNT
IKPRVMTATVPGSTRSMRFDHFYDSYGQPQCVRHDANIFWRCPARNCQED
ACDKLAFAFAPASATDVAAAAAATALQQQVLFLTDSNVDTLLFPSEADLD
AYIAQPKYAISKNLSNIGVAIVFDSGAPNWQYHLRVNRTLNEGYNYNLPP
TTLATDSLLKNPYDAPKACSRCSNQYLYSWYQSGALAVQNLVDSFIISEA
AGRPITLTASVVDFPSPGYTEAGFWGQVQSFFPIFLIIAILYSVSNVLRS
LVIEKEARIREGMRMMALTDSALYASWAFHFATTFTVIAALMVLVGGKLF
MYSDKGLVFAFFLLFFFATMAFAFWMSTFFSKSKTAAILGVMPYFAGYFL
TMALKPNSGRSAKLLVSLHPAGAFALGITAFTEYEDAQQGVTRFTYATSA
VGNYAFSDALGMLIFDIFFYAFLFWYFDKVFPNEYGTRLPPYFVFMPSYW
KSCCCRLGGGGSGVAPAYTDVQDVEAILAHGLTPDVERVPDVLAQQIKEG
KCIFIQDMCKTYATNTGPKNAVDRLNLTMYSGQVTALLGHNGAGKSTTIG
ILTGLTAPSAGVATINGLDVSRDMQEIRHNLGVCPQHDILFADLTVKEHL
TLFATFKGMPRAQISAAVETMIAEVGLTEKRNVASKSLSGGMKRKLSLGI
AFIGGSKVVFLDEPTSGIDAYSRRFVWNVIRKHKEGRTIILTTHFLDEAD
MLGDRIAIMANGKLRACGSSLFLKNHFGVGYNLTIEKTPLAEASRIQQYV
RNKVAEANILSCVGAEVSFQLPRTATNAFKALFEGLDKHKEELGIETYGV
SVTTLEEVFLRVTRGDETDVAGRAAVSERRHSLEERRQSMEESRQRRLSS
TGVAFPGETALDKSLPPIKDLGVGDAKTPPAGGDSGTYVKQHNCVASTRD
KDGLAIDYHNHWRFFRRHMYALLVKRYLYFKRDKKAWVYQFILPAIFVLV
GCLLMKAGVNSIFAEDMPPLTLGLAAYNPGIRANSNPLPFNADGSPFGYT
VWEDNQFVLNPSVVGQAAIMAAIPAGPTLPTYSFAPGFVQNVQNMSASLL
ASRVDWKASRYGALTFAVVNDTQEFNYNVHANYTGAHASAIFTNLVNGAI
LQQFAPGASIRTTVKPLGVTRNEVATASSFDGFTIVIMIMLSFAFIPAAF
ALFVVRERETKAKHLQLVSGVSFFSYWLSTWLFDFACYQIPLWMTIAILK
IFGATALMDGDAFGATVVLMQMFGASVTGFTYLTSFMYAKHSTAQVATIL
TNFIFGLILVIVTVIMTFISTTRDVAWKLVYVFRLVPAYAVGNGLLNVVF
ADLFSMLDDNQYTPYSKKIAGWSIIYMSVETLGFMVLTLLLEYLIRRPTM
AKLLGGAPLSATTEAIKDKDPDVLKEEARVHLEATAATNAMNKEEDVVII
KDMTKVYPDGKFAVRGISLGIPNGECFGLLGVNGAGKTTTLSILTAEFPP
SSGQVRLGGYDIAENPEVVRRLVGYCPQFDALFDLLTGREHLELYARVKG
LDEAQVKAVVTQKIQEMDLAEFGERNAASYSGGNKRKLSVAMAMIGSPQI
VILDEPSSGMDAVARRFMWQVISDITTKRGECCVILVSHSMEECEALCTR
IGIMVGGRFRCLGPAQHLKSRFGMGYQVEISVALPLFGGNSKVDLQDEAT
GAREELSEMDNAITVRLEAAAGNLQTDRLTMPQLATALAAIDRSAWLDRL
TSTGTGVDVLQTVSTSGSIGLREFAAWCRLEERVESILSFVGQHYPDAVL
RERQATKARFEIPSKDTTTGAPRQLSEMFGLIEEHKVPLFIENYSVSQTS
LEQIFNFFAGQQEEEKGAAAGIVSGGPLLALGPAMVLGTTQQGDGGAMDS
TNNSGGGSKVIPSATVV*
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Synonyms
Publications