jgi.p|Nanoce1779_2|672461, gene_6563 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|672461
Unique Namegene_6563
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:158128..161898 -

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Properties
Property NameValue
TranscriptId672547
ProteinId672461
Product nameaconitase A
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:158128..161898 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004409homoaconitate hydratase activity
GO:00515394 iron, 4 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0009085lysine biosynthetic process
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02450NO06G02450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672461mRNA_6563-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672461mRNA_6563Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|672461

>mRNA_6563-protein ID=mRNA_6563-protein|Name=jgi.p|Nanoce1779_2|672461|organism=Nannochloropsis oceanica|type=polypeptide|length=817bp
MKKAIEPAGKRNGGAVAEEGQEVAAAGAVEEGLITTLMRGLRGRGIGGGG
GGRWGGTGSKEECPQNLVEKIVQRHALGIAAQHRVHAGDFIAIKPAHVMT
HDNTWAVMAKFATLTQHPDKRSSSNGSSDSSSSRSSRGCSSNIAGSSSSL
CIADPRQPVLALDHNVQDRSDKNLARYAAIEAFAKQHGLDFFPAGRGIGH
QVLCEEGYVQPGWMVVASDSHSNMYGALGALGTPVVRTDAAAIWATGTTW
WQVPPVARVQLEGKLPRGVTGKDVILSLCGLFAEDHVLNHAVEFTGEGVE
CLGMEDRMTISNMTTEWGALAAVFPIDAVTVAWVQARAARLRAKYGRSDG
VPVPPRVRTCDRIAQELAAQGTSSQGWEASDQGAYYAQTISLDLSRLCSL
AAGPNAIKLVTPVRVLETQRVAIQKAYIVSCVNSRVSDLAAAAAVLRGQH
IAPGVELYIAAASSEVEKESKARGDWQALVAAGAIELPSGCGPCVGLGRG
LLKDGEVAISATNRNFRGRMGSRSAQSYLASPNVVAQSAMKGYIACVGGS
ERKEDEEGWRMIVSGMQRHHHHSKESGSSNCSSSSSDMAINSRATTTIIK
GFPPLLRGPLLLTLHPNIDTDGIYAGKHCYEDLNTQAQASVAMENYDPSF
ASLVQKGDILVTGPNFGCGSSREQAATALRACGIQVILATSVNETFRRNA
LNNALVVLEVPALVSELNRRFSLSPSAGKGGKEQHQQQSLPTSLRLADYR
IEVDFVHSVVRLVSNKEQRHKAKSVEENEFPFTSMGPVVQEIVVAGGLEG
WVRRLLQKQPPPARTK*
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Synonyms
Publications