jgi.p|Nanoce1779_2|631984, gene_6546 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|631984
Unique Namegene_6546
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_18:131175..134279 -

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Properties
Property NameValue
TranscriptId632070
ProteinId631984
Product namemuts protein homolog 1B muts-like ATPase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_18supercontigscaffold_18:131175..134279 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0030983mismatched DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL028ncniL028Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02300NO06G02300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631984mRNA_6546-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631984mRNA_6546Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|631984

>mRNA_6546-protein ID=mRNA_6546-protein|Name=jgi.p|Nanoce1779_2|631984|organism=Nannochloropsis oceanica|type=polypeptide|length=970bp
MQAPRHRRAVVLLALLLAVFETSTAFLHSLPTTKLRDVLAEGLRAAHTRL
PLPFPAAATAAAPFTPPTYSASLTAAKASLSDAELLRRARDNANNNPKNK
YKKNTNAPPSTSASTGQGQQDGAANPVGLVDIVSNLHERTWASLDLHVVQ
EQLASLCDTVRAKDLARSSCFAEDVHEVHRRYKAVEEVWQSVEPIPLNDP
MDIAPAVNFASRGNTLELPDLRSIAKALILLATLRDFMQAPQRAERVPQL
AAYSEGIDIPYELVELLTDAFDKDGRLSGDKFPQLKRLREEVDRLYGSIR
NTVGQLMKSTGMSNMITDEYIAQRNGRFVLPIKNTYKRSGLGIVHDQSNT
GQTVYVEPVQVIEPTNDMKRLELELLQEEARIVGEMTRLIAISKDRILGS
LDAAALVDISVARAKLGDVLGGAVVPEVGTEGCISAEDARHPVLVLRGRN
PVGNNIHIEKDKPGLVLTGPNAGGKTIVLKTLGLLALLVRLGIPVPAQRG
VRVDFFSPILADIGDMQSVTGDLSTFSGHLLVCKEVLSKAASGALVLMDE
MGSGTDPAQGVAIAQALLEALLETGARVAITTHYVQLKELAQKDDRFVVG
AMEFLDGKPTYRFKEGAVGESYALEVAERLELPSAVLERARGLMDKGVVK
VTELIKELENQRDALAGERREAEAREQEMRKMQAEMEKKQRQLEAREVEV
EKMKYRAKLQAADTFLAQLQEKEKKLEGLLKGVGLGDEKATVEEALRELA
AVRGQVAVDSKPEMVHVPSNIVLFKRDDIVREGEVVVCAGDQLNSDRAGK
VVKASGQNVDVMFSKGGLDIVITFKKTDLARAPSETAALVNAGPYAGLAK
NKEKKKKWTKADERNLKMLGKEMNTVSSATAVTLNAMRTSFNTIDVRGLR
LRDAESKVDNFIKVGIPQKRKVVYILHGHGTGQLKEGLREFMKRHPYVGR
HRSADESDGGDAFTQVFLK*
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Synonyms
Publications