jgi.p|Nanoce1779_2|640392, gene_6433 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|640392
Unique Namegene_6433
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:616906..626005 -

Link to JBrowse

Properties
Property NameValue
TranscriptId640478
ProteinId640392
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:616906..626005 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G02090NO20G02090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|640392mRNA_6433-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|640392mRNA_6433Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|640392

>mRNA_6433-protein ID=mRNA_6433-protein|Name=jgi.p|Nanoce1779_2|640392|organism=Nannochloropsis oceanica|type=polypeptide|length=2065bp
MPPKLRAYLQPYTPPSADWQILPSSKTPSSSLSSSTSSTPPTPQPHDEEL
YLTPDHRRVLWRPLGGPNVYKQWTFSTPVLQALWAYFSLDGGKARCLCVL
RDSELLVVYPPEGDLYEVALPCQTHKLWALGKEGLLIQRQLAGWEMEGLE
IGKGEVEKEEEGEAAVLMLGEDEKGGQGRMRMVMEEGPGGGVRRIGEEEE
MATMCLRPEPIPSLFSLRHPLEELKPVAVVEEGEDGGSKVAFDGEKEQQP
VLLCDAQERVIFTEEIGLPSGEGGQGGGPEGGEGVAIIVTYNDRNGQHRV
WLAHPTSTEEEGDEGEEEEGEEEGWGAGGREGGMEEGEEEEKDLSRASTA
TQASFSIGGLGGGEHIRDSLGRDSAKGGRSRTSLRRRRSSLTGSEGSAGR
RRSSLGMGGREGGMEGGRLLLDDSSQYHAASTHQSRDELLASVLGLSSAG
DDGKGGGSGGGGGGRGGGGGGGGGGGGTSILPTRGGKGKKEEEGGGFYHE
HEHPIRISSSSSSNSNSTALTPLVSFSVEDGRVVGEEGKTIAALESVVGE
RLNLVFNDGSRDRVRLGLSFHELDTDHLLPTVLDALHASLPPALALPLRA
DVAHAVDCLTRGEGVREGGVVMSKTQEVAVASRPGWSAFCVVVNQLLLAA
TKEGGRNGREGGREGGNADKSSGYSDSTSGSSSSSSSSSSSSSSRSLFAD
LLSSSFHSEYSEAHASFLHALPPPSLSPALSPSPPTVHLPHLSTPPLELL
RFLPPLIETLHLVFQDLTLHTLRWGELRPLARFLLALSRALSLHPSLAYY
QRPSSSHSSPSFPPCPLTTPVGAALVKAGSCIRLRQIVRFLRATKGVGRE
GGREGGREGGRAAWGVVEAMVEEGIQREDLRTFPAGVALPLYDAVHVARR
HAMVSMLGAGGREGERERRRVEAYKLIGREDLAALQTESSSSSFSSSFSF
SSSSAVPPSTAAAAAAAASAAAGGAGATGGVADGGATGGRKGKKRGGRAG
EKEDEDEETALKADRDGLRLVEEEAAMRFGRDHRMREVCRLLTSSRPVFL
KVDRPAELSDHEYLQRQQSKLLLLCRRSLSSPIARGMLTISSFQPLLTEP
LPLPRLCLAASLPPSLTTLHLDTSAYTPDLTLWPEFHNGAAAGLRLAPAL
GRGRDGGRGGGITRSWVIYNRPRIPSHAHGGLLLALGLQGHLSALAVTDL
YDYLTQGHDPTTVGIFLGMAASKRGTADSTISKMLCLHIPSLLSFAEVEV
SPVAQTAAIMAVGLLYQATAHRHMTEFLLTELGKRPASDRIQDREAYILA
AGLALGMVVLGKGRKRGGGKEGGREGGTGGEGLADLKIEERLHRYIVGGK
EGGKEGGREGREEEEDESGLLFGRGKGGREGGREGARKGVGGNKENGEYR
CGHGFDSSKCSRIYEGAYINTDVTAPGATLALGMMFLKSNNAGVAARLAL
PDTHFLLDYVRPDMLLLRVLARSLVLWDSVQPTSAWIEEQVPPFLAASFA
RLGNAEEGREEEEEGEAVVDWQSVRQSHAFILAGACFALGLRFASTEDKS
AAASIKAVLHHFRRLRETYPGGGRDGGSDAVAMAQRPERSILEMCLGTAG
VSLGLVMAGSGDLDSFRFLRQLRRRVDSEVTYGNHMALHMAIGFLFLGGG
RAALSRSDTAIAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVEHRGVE
AVDLDLIEEVVTRSPRYYPLSFRLAKEEGGRREGGRKAWVGSRLFEGTRR
RILVKRKPGHLSYAQDPQALRSLLVRPFGSSSSSSSSSSSSSTEGGKEEG
QHAASSSSSSPWELIAAFTEDPHLLAFARHFCGGSSSIRGVGKEWRESQR
ESQLCAGVLYECLTREKPDLLSLHLSLLHLVHTLPTMPPVTAACTVRTVR
LILTYYSPAACLRRRLRGREGGRQDGGKEGQGLAPPIVFSRKGVDGQEGK
SEGGGEEEKEEEEEEEDWLLQADLVQSLRVRMDELFSSLGYGEGRKGGRE
GEVDGKKGVTTLQGAYLLYNDLPSLFSSSLSSSSSSSSPRASSSSSWTAE
EEGRRRGEEGKERR*
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Synonyms
Publications