jgi.p|Nanoce1779_2|671948, gene_6360 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|671948
Unique Namegene_6360
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:445082..451546 -

Link to JBrowse

Properties
Property NameValue
TranscriptId672034
ProteinId671948
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:445082..451546 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003777microtubule motor activity
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0005875microtubule associated complex
Vocabulary: Biological Process
TermDefinition
GO:0007018microtubule-based movement
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01450NO20G01450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671948mRNA_6360-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671948mRNA_6360Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|671948

>mRNA_6360-protein ID=mRNA_6360-protein|Name=jgi.p|Nanoce1779_2|671948|organism=Nannochloropsis oceanica|type=polypeptide|length=1929bp
MQAMAITPPTSRRRSRQRQSDTIRVCVRVRPEEIDSEDEGEDPTTKAKRL
CVVAGPDGRTVSVLTDVTTHTTGTISSRKKSVAAMTIPATTARSFTFDHC
FGPHASQAELYEMAQPLVQSVVDGFNATIFCYGVTGSGKTYSMTGTPDAP
GIVPRATVELFERIQAANTSISNADRNGGEEDEGVKFLVRLTYVQLYNND
FVNLLEGTTAGGEAKDAAPATPPPPFPLSPHRYSNSSKIEVRENKEGEVY
LSGPADLHVTVTTAAEALSLIAMGNQARATGSTKCNHHSSRSHTILTFHV
ESRILHPPSLSSSLPSSSWQVRRGKLHLIDLAGSERLSLSGAEGGRKTET
QNTNSSLTVLANVLSALSRNALNERRQQQQQQEEGKEEGAKEEEDGGRGA
KDDSSLAESKLTWLLKGSLGGNSMTLMITTLRPCLPYQKQTLVSLLYAAR
AKNIKNNVFIYTDIVKESKLNEMSAEIEGLRKRLKARAAELDRLMVREGG
REGGRSWLTLSCGGKGGRENNHRRRYEQQYQQEEVGEEEEDGWRFLQQQQ
QQQELLNRRVEQLEKFYLELEKQQSEISSLQSALVELQNESVASAAAAAA
EKQRQRLSEEMKEVQKVVESWQAQAISTQQELVKTTDQLRALHQERLADR
RQLEKARIEGQRARAQSHIMGLELAAARKGGKALEEEWRMVRVRLKAAKE
DFERQASVLQEEGLGLRVRLDAAEHEVKMLRKQSGKMKKGRDGDVLRLEE
LLQQCENERDEALQLNREEEGKGRKLLVLQRQLEERETELELVKGACKAL
EKRLINSEERLQGVVREKDKEVKKLQAMQISVVRLEEEVGEARKEAVRVA
RKKREEEEEEEEGLKRARRGWEEEMQGLRRQSEEEGECRLQRVVAEAESR
MQHQQQEMEEISKEERKRVEAQVRAAAEEEQQAVIAREREQHLQQLQQLL
EETESLRAEKKHWWDLCKEAQLALTTEQAKQQVAMEKKCGYVQQLEHLLE
KNQAQLDEKQVEERRWRDLCKEIETALAAEKEERTKVEEEATKNRELLQQ
QLQQLQGEQQTQLQALQQAKDALTVEKEKRTQLEEVVRVAEHAATELGRR
EGRREVGREVKAKVTNEFESLVLFGKAGAIREVEKGGYNRDEEEEGPDLE
WCVRLREGLQRRLNEVEEEQRRAEAAAVSATAEALVSVQQEAEEHLKQTK
EEWQRQIGKMQARTEKEWKETLKAQQQRGRQQQEEMRQRLNEMARRNAET
AATAVRAAEWAVFQEKGAAFEKERKEMEDRVMRERQRERTVSARVVQRMK
LQIERVRREHDQEVREAVAGRNREWMERWDAAMIERKKELDKVRRVTEQE
VDERWQVRLREMLLEKEKYYGRKYDKLQAEARTEASQRLAELEERLRKEG
KEKGRRQEEEYQEMLAEVRERVETAARQLEGADKRVNEAVQTVRKEVWEE
LREREREVEGLRERLLQTEYDLKCQLAVRPQDKQQQQQQQQEKEKAGAGA
VSYSSAARSSTNTLVPTAAAAAAASEAAAVIKARAEKEHDPRSASSAATF
HSNNRPAALPPPSPTTGTLLGQMRSALLDGNALQLQKLLDEHPNLLKQTF
FPVSPSESGEKQQQQQQLLLPYHLAMHGFTFHADLPRLLLTLNTLIAYDS
SSSSSSSSSNDRNSNDCRRRSSSSSSLLLVARDCQGDSVFHALFKHVGSA
SVLFPVLEKLLRGLTMVTTAAATETAGAAMPAAGTISTSTSRMNTSLTND
MDNIVWTRNAEGKTALELGVLRALASPDTLPALHRLLELVPQSCLDKRRN
DASSLLSFALLQATTSRLAKKQQQQPFFSSLRARSRRTGEKEKEEGTDDV
PLYLGVLAALSPIYSIGWDAGWKERGTGRCQGQLLALLAPTTEGQMWSEK
AQLLYDTIVRAALRQGVLVPRVVSAQNG*
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Synonyms
Publications