jgi.p|Nanoce1779_2|631479, gene_6334 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|631479
Unique Namegene_6334
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:367613..371564 +

Link to JBrowse

Properties
Property NameValue
TranscriptId631565
ProteinId631479
Product nameDHS-like NAD/FAD-binding domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:367613..371564 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004407histone deacetylase activity
GO:0008418protein-N-terminal asparagine amidohydrolase activity
GO:0008759UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
GO:0018748iprodione amidohydrolase activity
GO:0018749(3,5-dichlorophenylurea)acetate amidohydrolase activity
GO:0043747N2-acetyl-L-lysine deacetylase activity
GO:0043748O-succinylbenzoate synthase activity
GO:0043864indoleacetamide hydrolase activity
GO:0047419N-acetylgalactosamine-6-phosphate deacetylase activity
GO:0003677DNA binding
GO:0008270zinc ion binding
GO:0017136NAD-dependent histone deacetylase activity
GO:0051287NAD binding
Vocabulary: Cellular Component
TermDefinition
GO:0005677chromatin silencing complex
Vocabulary: Biological Process
TermDefinition
GO:0006342chromatin silencing
GO:0006355regulation of transcription, DNA-templated
GO:0006476protein deacetylation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01210NO20G01210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631479mRNA_6334-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631479mRNA_6334Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|631479

>mRNA_6334-protein ID=mRNA_6334-protein|Name=jgi.p|Nanoce1779_2|631479|organism=Nannochloropsis oceanica|type=polypeptide|length=605bp
MADLLDPSQKRRGGLVGRGESPSKWARQDEGAASGKSSIIRAEVVVAPGA
GSAENREGAKENETPFPTSLTAMSEATLPSDSCTRSNTSYESLVTIGMVP
DGIEKGEGGAVTSVGGAAENRPMHGHDVYDNVQKQGVDENKEEEEKNITA
ESRQQQQQQHQQSRPMKEQEVDDTPPSSSSALSSSLPSQPHRHRQQQQQQ
QQQQQQQSHFNSPEAPRMDGVGHWLLMQRLKGVDPSLLLLSLLEDAGLAL
TMPLSAMSQDTQWTLIRRLVLRDVMIYRKKIRHVNTLDDVVGLIARSRRI
LILTGAGLSVACGIPDFRSENGIYARLGEYHLPDPQSMFDLSFFQGNPEP
FFQFARELLPGKHRPSRSHRFITSLERRSKLLRCYTQNIDSLELVAGLSQ
DKLLQCHGSFETATCLDCRRKFKLDEIRDAINMQRVPLCPDCCPDQSEEA
VAATAVKDGLPPSSSLLSSLPSKQRGLIKPDIIFFGESLGDRFTRAMDHD
KQRVDLLLVLGSSLKVGPVNKILQWLPERVPQILINREVVGAPNKFDVEL
LGDCDAVINEIWKRLRWREEEEEGEEERPKEAEGGREGGLFCMRTNLQQE
ELGG*
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Synonyms
Publications