jgi.p|Nanoce1779_2|543833, gene_6322 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|543833
Unique Namegene_6322
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:341605..345341 -

Link to JBrowse

Properties
Property NameValue
TranscriptId543919
ProteinId543833
Product nameSpc97 / Spc98 family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:341605..345341 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01080NO20G01080Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|543833mRNA_6322-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|543833mRNA_6322Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|543833

>mRNA_6322-protein ID=mRNA_6322-protein|Name=jgi.p|Nanoce1779_2|543833|organism=Nannochloropsis oceanica|type=polypeptide|length=1028bp
MNTPFSPSTLASSFLSSRSHSSLRPPPSSPSSHPASFMPTLSRDMEVVRL
MEQLCRHMVPFSSSSSSSFAQQDDPDAAAATPARDARKDEALLRSCLHKL
GTCRRPPEAALDEFFTLQHAQRKVRRQYEGTGQEERGRALANRLEELIRK
LGSPALKNQLEQRWAALHLLTLLGRDGRPAARVRGSDGGGGGGGGMGERN
RADVMDAFVSADLPSASLLYPPSRPAAASAAASFPSPSSSSTSLSYPVNH
HSTTSTSNTSTFNQLNGRHDQQQQQQPSVHLFSSSHALVTAQHSSLLIDA
AEAAEAEQALLRDLLYSFQGIDGRLIKFDQASQQHVLHPSLRSTFGPGML
DCILHISELGWLYRKVSQAADRAKRQQREVGLVGQALGHLLQDELTEYYR
LIAVLETQMNDQQHQQPQQQQITNNNSSLFTAAAPPPAAGAVRSGGLTLR
RLTIWVEEPLQRLRLLATLCDSLAHVRGGALASVLYGHAYQGDPQAKSLV
HRVLRRACVPLFEMLRRWVLEGELLDAYGEFFVVAVKGGGGGEGWGEGGS
DESLWHHCYALRPGMVPRFLPPSLAHKILVLGKSINFMRHCCHDQEWRSL
PSSSSSSAAGAAARHARRAAEDTDFSYANVDTLNSVVDQVAAVVNARLLS
LLLGEKYKLMAHLRALKRFLTLGQGDFVTCLMDAIGPELRKGADQVYRHD
LTGKLEAALRSSNAQYEEAEILNRVGVRLLQASGGEEGWDVFSLDYHVEA
PVSAVVHKGAMEMYGRIFHLLWRLKRVEWLLATSWKAHMMVGHLPVASGG
RGREGKMGVLSGMLQRCNLTRREMVHFVSNLSSFMWFDVLEASWTRLEAD
LAAATDLDSLIAAHDAYLQRVTHTSFLSPDKAPLLAALEAVLSSIIAFCS
LHSDLCGDALRVHQQKEAFRKVVEHRTVKGEWGLSQAEEGSGEGGGEGGG
EGWGEERWVDRYADRVEVTTGEFGRACENLMESLQQQGKGAAGRQAAVAE
ADAVRFLVFRLDFNLFYTRRRLTRRKR*
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Synonyms
Publications