jgi.p|Nanoce1779_2|594404, gene_6273 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|594404
Unique Namegene_6273
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:195689..199234 -

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Properties
Property NameValue
TranscriptId594490
ProteinId594404
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:195689..199234 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G00590NO20G00590Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594404mRNA_6273-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594404mRNA_6273Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|594404

>mRNA_6273-protein ID=mRNA_6273-protein|Name=jgi.p|Nanoce1779_2|594404|organism=Nannochloropsis oceanica|type=polypeptide|length=1019bp
MWPMAPIRPCVSVAASSVLLLLCMGFAHAQSLTTYASRIAGLKGDETVKA
MKVDNKGNTYVVGDFGSDSITIDSTFLHNFGPASKMIGGTTSDCYVAKFR
PSGTLEWAFPFGGDRNEYIRDIALAPNDDGVFLVGNFESEVLLFGSEAGP
PVENIIYGVRNQIELNTFIIRVSPLGKIQWVSQTGDSDVASMALDTKHGL
IYLVGGYAGDPILVDKNDDVLPNFGSKWSAGLEVDDDGGDEGMGGGGLFD
ISSEEENDSGGINLFAKNKADIYVDHYSMATGDLIEGLVFEGDKDNFATD
VTLYPQASALFITGYFYSTRLKVSPVFSLSNDEGTDSGKRFGGGRRALPA
GYVVRMDSEFGSVLWGKNLGEVDASPALQIAVDDSSDSVFVTGAFWSSGV
LAMSDKKTAGLLRLSQSTGGIVWAKPLPRVAAIATDLMGFVYVAGTYTRP
VTWSAEVGLPIPGSNDGDVYLARAKVEDGQVVLTRSFEGERRGTYGVSAM
EADEKGNVYLSGNYTKGSLNVGGQVLLSPGKDVDGFVGRVLLASEMSEAM
TAGAVLAPSTVQSSWTSPPSPAVDIKDTGVTPSAAGTSPAAAASPAVAAS
STAGTPTAMVDHQAGDNDGEAEPVNITSLNDGSNSPLDASPTQITPSVAP
PSDSKSSSQLAPTGTRRPTLEPNNRPTRSPTIRPTPPPRFRLTWAPTAGI
PGNAVGAARPDTAKAAAAPAAIAPTAAVMAAVEQQSDASTSTLPMEKMEV
SFVYAGPVSDIRYLQIALYQVLKPEVSSYVSLPVVKLDTGRRRRILHGRL
LAPGEECSDSSFPKILLRLHIECATEAAVVTVGKLLGDILSGKIVLKTGD
RTFLTSLICSLTAVESVEVTPPPVAVKAANASSSPPPEITTTSASSSLSS
STEEKSKTAKEGKKMTNVGIGLGITFFVLVAIALVAGFVHRKAKTDEQTS
AEDEIRDAEWRQAWRLEREREKMEEKSFTNTDVVTNDETPFRLSQLSPSP
VSPSYTPVSLEQQEEGQP*
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Synonyms
Publications