jgi.p|Nanoce1779_2|594391, gene_6270 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|594391
Unique Namegene_6270
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:186469..191743 -

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Properties
Property NameValue
TranscriptId594477
ProteinId594391
Product nameABC-2 type transporter-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:186469..191743 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0005524ATP binding
GO:0016887ATPase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G00560NO20G00560Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594391mRNA_6270-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594391mRNA_6270Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|594391

>mRNA_6270-protein ID=mRNA_6270-protein|Name=jgi.p|Nanoce1779_2|594391|organism=Nannochloropsis oceanica|type=polypeptide|length=1580bp
MDEDDGTIIGGSLDGEQVIASFPGLKPSPKTQLRTQLNEASKALMVEHEY
IRRLEEALAAHGVDDLEALRSDLVPSASFPSPFCLNGPSIRRHGPNLGPD
ALTFATPSFSSTTETFAHTLVRSASTSGAAAMLQHYRSPSHLTRPDYNEI
FDTSNCTHPPKLIRSESVFAHATEVRYDDLNYTVQKHATRDGTLTVGAQC
LKLWSWPFACLLRRNQEQQRLEIKILKNLRGVLLPGRLTLLLGPPGSGKS
TFLKALSGRVERTRNSVLKGRVTYNGDTAESHRFSLPKVVAFVSQEDCHA
PTMTVQETVQFAYDCMNGPPPQVIAPSSLQNSTASNTDLPKHVIYEQQHH
ASASFSSSSSSPSSSSPSSSSSTAALSAGSTTKKTGKVEQTLRVLGLSRC
QRTIVGNALLRGISGGEKKRLTTAEMTGGQVNVLLMDSISTGLDSAATFD
ICKTLSVCTRALQANIVVCLLQPPPEVFDLFDDVILMDGGQIVYQGPREK
VLEHFEGLGFRCPPRKDVADFLVEVTAPMGSGYIIPASQRHAAGIPDPPR
TTDEFVRAFQQTEIYERMVDKMEAPPSFAPWLRRQRHEFSNSWFRSTWLC
LQRQIKITARDRVFLRGRMMQVLLMGVMAGTLFYQLDAHDWSDKVCMLFF
SLMFIALGNLATIPTVMEQRSVFYKQRDSGFFPTSAAVVAQMLVQIPIQF
VETLIFTSLAYFLSGLSRAEHGSYYLTYVLVAFSTALAIGQIFRLVVHVV
PSLAQAQPICALCVLLFVVFSGLTIKGEDVPIYWKWLYWINPLAWGLRAL
AINEFSSPTYGTHIIYPPPIPKAVPCDPKWPEDLLKHSFPGGPYHCLTEG
EIYLVNLGFNTTWEWIMGGILFLLALWGAMLLFTMLAMHFVRWTGRSMMP
LPPAAVSEMKGDCGQGEDRRKGKQMIAATGAGGDLYSYQALTDGADETAH
SRSSRRHSHTMGASLSFTPVTLVFKHLWYSVELPKPRGGGKERVELVKGV
SGYAKPGTMTALMGSSGAGKTTLLDVLAGRKTTGTIIGEILVNGFEKVQS
TFSRVCGYVEQQDVHSPHSTVREALMFSATLRLPYDQVTDAQRVGFVEEM
LKLMELEDIADRVIGEDADSGLLMGERKRVTIGVELVANPSVLFLDEPTT
GLDAAKALEVMRAVKKIAASGRSVICTIHQPSCVTFEMFDMLLLLRHGGR
TVYFGPLGEQSAQLISYFEAVPGVASMRPGGVNPANWMLECIGAGIEPAA
QAVDFAEFYQEHALARRNEELCETLGQPSALYGQQLSPIAFETRYAAPLK
VQLRACMTKAVTNYWRSPNYNVTRCLISCVVGVVFGSVYHDKAYDTETDI
IGRTGLMYLSTSFVGIVNMMSVMPVMAKERAAFYREQASSMYSVLAYGIS
YGLVELPYIFVSTGLFVNVFYWYIGLATDPLSKFVYYWIFFALYIICMVF
IGQFLICLLPNQQTAQVAGASIAATMNLFGGYLCTPKTIPPFWKFVYYLV
PSHYMLEGLVMSQFEGDKTPVKPIYGVQTTPADQYIYDHFGGEFTYGAKW
KDIGVLILYISLLRVGTFLVMKFVRHINR*
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Synonyms
Publications