jgi.p|Nanoce1779_2|84385, gene_6191 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|84385
Unique Namegene_6191
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:761518..765584 -

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Properties
Property NameValue
TranscriptId84471
ProteinId84385
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:761518..765584 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000156phosphorelay response regulator activity
GO:0003700DNA-binding transcription factor activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|84385mRNA_6191-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|84385mRNA_6191Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|84385

>mRNA_6191-protein ID=mRNA_6191-protein|Name=jgi.p|Nanoce1779_2|84385|organism=Nannochloropsis oceanica|type=polypeptide|length=1122bp
MDHDPYCLHLPCGAVLPASKTATATATAAVVTAAVVTAATAATAAAAVAS
TSPVSSLSSSSFRPSSFSSSSSSSSSSRSSSSSYSSSRPSSSSSISSISS
SSSSSSSSPPFPLRLLLVIKDAKRALRLSHAAQETDDKDGFRVEVVRSAL
QALSRLSVQHYDVVIMEADFPMVDGVAAVRRLRRFEGWLESLRRSDAALP
PALGVKQEEGEASAKPPSFVVLVENAVDRRSDGSEGGREGGQGVHSFERR
AWRAGADLVVRNFEDVCLTNIRSIVVNAAAAAAAARDKREEKKEREEEKV
QAETGLRMDRNGAVVIGMRVTETMIRGREAEEEVQQQQQEDQKTKEEERR
ENKSEGDMKEEDLLEWEGRRYGGEGGREGPSMALTVTALGDLETQASETC
RLENGINTIIPGSSSSNYCQRQQQKQQEQQEQEQEQEQQQINLPTAPAVA
TATAMAAGPTSSFPTVPSNLPIASGAATLTGGVYGGGGGPAWSLEGGIAR
SVSSLTFSTASGINSSSSSSSSRGGGKDGTSLYSFIPPSVFSTAALGTGG
GRGGGAKRGREGGGLRMEELQSMDLDNTLGNINNDTVKRPSALPPSSFPT
LPYLPPHWPTKLGTRTLLPFSPLLSSSSFTNSSSTSSISSRSALARKRTF
IKREEEEQQEQQEQQQHPKFSPPRHSSSFSTVPSSASFSSSSHSIILNKA
RRACAYCHNKKVSCTCTRPCRRCVDMNIECVEYEPRPRNASWNRRKRAGS
MASVDSEGVESIKFPGSPTGRHPQSRQKPGEKSAKTNNGVSPSSPTAAAA
AAATAAARAVETQQYFSAPACSSSPDMKAAMDRIPSSSSSSSLVSFLSSF
FPADDSLPPTATAPSCSSPPTPPGLVSTPASVGKGLLKAGGKTGRKKRSV
FEAAATCTEKAWKKQHFHQNPQENDEERQQQQQHHHHQHRQQQPQEKVSS
PYHHATAASSAVTRPQAAAAAATPGLTASLLSSRTLLPSGAVEGRGGGLS
FDCPPSYRPSVSVALRQQQEKVVRLMREAGREGGREGGVGGTGPRFPMPA
HLQQSITSMDPAVLRMCEGGRGGGGGVGGDSIWFHISSINQCSQQVIREE
RATRVGKGDELETEKGDEDIY*
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Synonyms
Publications