jgi.p|Nanoce1779_2|80933, gene_6055 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|80933
Unique Namegene_6055
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:423183..426080 -

Link to JBrowse

Properties
Property NameValue
TranscriptId81019
ProteinId80933
Product namerCG29929, isoform CRA_b
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:423183..426080 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0004386helicase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|80933mRNA_6055-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|80933mRNA_6055Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|80933

>mRNA_6055-protein ID=mRNA_6055-protein|Name=jgi.p|Nanoce1779_2|80933|organism=Nannochloropsis oceanica|type=polypeptide|length=821bp
MVSTNAASKRAAADELRLVESKLSEVERQLRALKDERSTLLSRKVVLKET
VEAQDVAADVDWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLS
EMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQCYQLESI
APGKGVMLAGAMSQEESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMST
LEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAV
TATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAA
VWSFLRAQHPRQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELK
DRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESG
RAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRV
CRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLL
RGLAAKEKRCTHRQLADLWLKEARKERRAAVTYKKERKKATGGEEEQDED
EEGGEDEEEDDEKGREMVLQDKETVELLLNQLVVESILGEDYHATAYSIN
AYVVVGYRAAVVERGEIQVWMEVEISSSSSSSTSSSMASAAGAWKDGRDG
GRGGGKRGGGKGGEGREAKKRKTELGAAASTAAVSVAAAAVWANKVEEVV
EISSDSEEEKVDRKQEKESREGQEDMEVEDGEEPGRVGVHQDGEEEEGKD
VEIFDKGKGKKSRTITEGAEGEVLQNGKEKEMMMKKKKKLWKRLQKKETS
KEEEEEEKEESAGEEFDFFS*
back to top
Synonyms
Publications