jgi.p|Nanoce1779_2|593601, gene_6051 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|593601
Unique Namegene_6051
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:405529..414232 -

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Properties
Property NameValue
TranscriptId593687
ProteinId593601
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:405529..414232 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01690NO16G01690Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593601mRNA_6051-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593601mRNA_6051Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|593601

>mRNA_6051-protein ID=mRNA_6051-protein|Name=jgi.p|Nanoce1779_2|593601|organism=Nannochloropsis oceanica|type=polypeptide|length=2857bp
MSFFFGGGGAGGGKVQQQPPTGSSLFGGAVAAPQPPQTGGTSSQPQAPQT
TSFSFGSSAAPASASVPSTGQFGSAPAAAAPPAPSPCPAPSPGGFFGAAS
SSQEQQPQTPQPHQPQQSTLSTLAPAAPAPASSSSFSFGGLAPAAGAGAT
TSATAPAACSTAVATSSTSGSGNDSNQAAVPRPSVKVDLRSLFSDALTDP
RLFSDEEVSEQLDLLLEPGGPSASASEALKCALKSLSFRERVVASLEENS
ALHFYGVATEQTGKDFDSFAKGQKGMCLLHGWDPKREASDLQGKVDLVEG
VKGLSRYLRLTEERAMQVLFLYLKDQVRLGLLGEMDSREYASLALHDRVR
RFYHNQRVFFLKNMQEFLRIDLDPDYFQPELRHEVQQLLDGLSQAGAGAS
SFVDRLLGAFRSLCHDMPPHAQELSRAYPGTTATRQGRSPPTWEKVRQEW
VEQNVVEQGEILTLLLLVLAQRVSLGFGSWCQLLDLWRDLRMGELTPEKA
YLIAEDATTLRRARRVSGLMTLVAIQGLQLGSLALPSAVGGIGGEEHPFA
AELMQLPKGGAVQIEELFYAMRDPARAEDYLAAPELISVILLFFTCFLHL
SGPGLRSQLSPDLKRRFWDRAAELQAYVTQRAAQAHLAELVATLLSDDEG
AAAAAVAMTATPDTGGSVLDQWARLGFHSVLRREADCLRPGLSRPEVEAL
QVPLSDAVNALVAACYAGLPQGPPPLHNQSMTTKKVEYFVFLVATIYHGH
SPLAYCFWEASGLAAGLQLEAVEDASGMQLSSMDGRNENAGHPLEFLATE
ARERHPLLYFHLVASMACDAATATWVAVELSRAPLSTQAYDERVLEHLGE
RSYRVQQESSFFDPETGVLVPPGTQGELVQEAPGRVPRLMRWDMSLWAAV
VHQLEDFAGFVARCHLLPMVDTLEGLRRKAMAGEGLQELGFNTVVDRCPS
LFVYGPCPARTEDVVRELLRRGAWGMVRYILRRVEMVLDQFSLLLGLEQR
QQQQQARRRAAGGSDDPAPLSLLDVLTEADGVSTVGMAPLAHRLPARLFD
VVRVASEALTGRNEETDVEALVDLQVSALSLLGRLVRTNSPLPWRAEAVR
TLVMEVGDVTGGQERVPVIVWVGLRSMEAERTLNQYRITRVVLLLMHSLV
ESACDVNWEGKEMVLPSGLSDDFVTRLVDFSTKVLLFLEAWTFTRSLDRW
LLALTCLDLLAIYSSTPFAAPAGVLAHESTWGLENHRQSLLRRFRQDGAL
MRMLLRCAEYLPGSALRDMLKTRTKRKMPHRFLDELHSDGAESPEGAQGL
FVARDGILPLAFDRKGLGSTASREEMAVLQRLGTASLKMLSCVIKHYLAS
PTPTASAETPHLFDAAGPGALEMIMQGADIAFWGSQSQDQSPQSFFNHAG
GRRRPFVTHITLIASLVTYGEGEAAGGAAGIHLSISAMELLGLVVRYLQR
NCRLRQKELMADLPDWPRNLPYPFPPGVMEDILSVTDARGFRQGLFAALA
RASTSGGVLVAMLDLLVDVTRLQPSLAKHLVFFRPRPAGSSSSNSRSNSN
EKGKRGADQRLEEVLLAILHKAQGLVQTDLDRECQRRGGKGRRTRMREMR
EGESGMLVLASALRFLCVCLRRATPARRLELVSLLDPAVWGVLEWAVQNV
ILEEASEVKVAEVLTHCHRLSVHRFVLEILSLLTTVMIDTSEQQQQQGGG
GRALSLRNLEMAVPKLIKALLGGPHMSALLNQYLTASFRPEFVEDLSGRA
AGPQGEIPLTRFRLPDWEVMLTDSNPSRYGSEGFFFDLPAVVRLLHATRV
GAEMGEEKRVDVERAVRLLNQYYSISAAQHMVNKACKGLLMVLLGHMRPD
MGHSEAWNGSVNVDSVAHTTLHILIGDEERLRCGMSAFEGPGRESSSSSS
GGTRNSSRNDDPTKEAARRWRADSVDVARKMRQPMLELMLTIVDRYAPDL
TEEIVNDILRTVQQSFQECKTENAFLEVGVVVGSSSSRCSSELSLLDLRQ
CLLTTSLILLQIHPLDGTGYIVSGQSQLEGILAYTIGSLSSLDTLLVEGS
QEPMAPTCRSERLDAVLRTAVALLSTLLMPRTHEPDVPMPALSGGDEEKQ
NQMQDLHQQQEEAETVILRKFREHRILSSLLRHWTAASRVAATAFAALHD
YTTVSGHAARSTAAQEALLDKSVHVAVKRLRTLLRFLEAAAFTSKEFCRE
LLQAGWVTLLMEDPVVACLVRAVEGGAHGMGMEQLLYRRGYRADGEESPY
YALWRGLVRLMARLLHSLTPPNLGYEAVLALHLDERDPSLAYANPLTPDE
ATVVREVAGFWRRLSPLLLWPLGEDKVLTLGLLREAQSVLALAREMAVHG
YTWRVAEPARAEELRTLIKGMVVRTSLVLGQVQSMAGNDGGTPVLSVLRE
AFAPVSPEEARQYRSWEEGQWETEDNGNGKSTSLTGVGGLEEKVSDMLIA
ILGSALGFLRYTGPLRLPKHIPLTPEEAAQVILAEGTRVWYRRDGSQGLE
EGIVQRRVREFHPQEACRMGTYDLVRRRDNRVETGVRPERVAIMEDRQQD
QDQAQDFDFDLLDSGTVVPSFNNGRLSGAHLLVLARYALDSLRRLPTEEE
ADSSGEEMGQKTRAVREEQEGHCTNLLIHALYLLLVASRSFLRARGGLIQ
NKERVLPRFMTALMDVLWDATEWRHGRYRAEYGTYDTTGGDGGGSNTYTQ
GSSSFPHHHHAPLHDIFASVSESDSAEERLVNLRERIDQLVGKIRAGQEL
EAGELQAVLLSCYRCMKSLPSGLPAWLVAEAGQHGYEVGLGDYAAALRAS
SQDPKLTRMVDLLDDMIETVGLPKLLQELNRKACAAGRAKGEGGIGLGTS
CLMLPE*
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Synonyms
Publications