jgi.p|Nanoce1779_2|649175, gene_5987 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|649175
Unique Namegene_5987
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:248007..251019 -

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Properties
Property NameValue
TranscriptId649261
ProteinId649175
Product nameVitamin B6 photo-protection and homoeostasis-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:248007..251019 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G01090NO16G01090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|649175mRNA_5987-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|649175mRNA_5987Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|649175

>mRNA_5987-protein ID=mRNA_5987-protein|Name=jgi.p|Nanoce1779_2|649175|organism=Nannochloropsis oceanica|type=polypeptide|length=546bp
MTVVAVRRLKPNNSSNSYSTCFGCNKPPPIYKRQSHLYDEDKKCGPVVRT
ILSARRRRPYSSLSPSSPPHIDEDNNIMPMAIVTTRSSASRRMAAVSSTG
ARSNLADLQQQLEQQQYYQTRLLSLNLSMGIKGRIERYLRQSFLPDHVTP
DYYNYTRWRVLQRLISATVSVFGTRALLLALGLKTERVGLTATFNWIQKD
AFGKFGRIMWASKMGRRFDSDAKRWRFRSSLLFAAGTGLEVLTYIFPAAF
LLLATIANVLKQMSMLTSSATRNAMYKSFAGDSQNLGDITAKGEAQIAVV
DLLGILLGIFLSKSIGTAQVGMAVAYILLSCVDVFAIYNEIRSVVFSSLN
LERGAMVVKAFVRKGREGVLNPNEASREERIFWNPASIDTSIFRTVSQTG
CSLEELHKVREAFSLVEKKEGGREGGVEGEKHFLVTWSPTVGASIVLHTG
ANQRDILRALLTWAYFEEAWKEGGVEEGQKQKQRQAWSMEEEKEEDQRQE
RALVMLKSAHAKAKETEECFLEALTNKGWDMRHTVFGKIKKRTEW*
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Synonyms
Publications