jgi.p|Nanoce1779_2|593329, gene_5971 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|593329
Unique Namegene_5971
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:216141..220272 -

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Properties
Property NameValue
TranscriptId593415
ProteinId593329
Product nameArmadillo-type fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:216141..220272 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005643nuclear pore
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO16G00960NO16G00960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593329mRNA_5971-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593329mRNA_5971Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|593329

>mRNA_5971-protein ID=mRNA_5971-protein|Name=jgi.p|Nanoce1779_2|593329|organism=Nannochloropsis oceanica|type=polypeptide|length=1125bp
MDAQALQQLEGLCETLYNSSNETERQQAQEQLLSLQSSAEYIPRCQYILD
NSHSSYALFVAANALTKLITQFWNNFTVTERVDVRNYVLSYLASQGPQLP
DFVATSLIQLVCRITKLGWFDDAQHRELVEEVDKFLHANVEYCIVGLRIL
NQLVEELNLPTSGRTLTLHRKTAVSFRDLCLFRIFQISLSTLQQVKCRQL
TNAAPQQEVKIAEHALNLATRCLSFDFIGTNPDESAEDVGTIQAPNTWRS
VVQDPATMTLLLDFYKNTQPPSSSQALQSVILLSSVRRSLFSTDKERAAF
LQQLVTAIRDILQTEQGLNYQENYHEFCRLLGRLKANYQLCELVRTEGFT
EWCDLAAAFTVRSFQQWQWFSNSIHYLLGLWGRLIAAIPYVPQQPSSTSS
SSSRNGGSSSSGVNYREKMQRCVLQVVQSYIKCMIESVEVVAHSDGSLDD
PLDDEGSLKEQLERLPVICLFQYSSVASYLMSFLDPIMNAYQEKILKDPS
SHRTAQQSPEVAREMIVLDGQLTWLVYMVGAIIGGHTSEIHSASSSGDGG
ATSQEAIDANLASRCLMLAQGLNVRAQQTGGAGPCSPRLELALVYFFQAF
RKMYACEMPQTLSMSSVSMAAAAVRMDGGGAMMKAKGYQTVYDLIGLGDQ
VAVTNIIVIKVGNNLKHWGKNEEVIARTLHLFLEMTMGIGTAKVLLSLDT
VQYLLQHHTPEHFPFLAVPANSRHRTSFHATLARLILSVVDERTAAAFEA
FMEPILQVLSQLQSTPDIRTEDAKQAIIGACRDLRGITAATQNRKAYCAL
FELLYPQHFPVFVRAAEVWFDAPEVTTALLKFMQEFVYNKAQRLMFDQSS
PNGILLFREASRVLVAYGSRVLQHPFRSDVYKEKYKGIAISLNVLTCALS
GNYVNFGVFALYEDPALDDALKIALQMALSIPFQEILAFPKLSKAYFAFF
EVLFRNHIPAALSLPTPVFLHVIQAQHEGLQSVDTLLSAQCASTIDYLAT
YFFQNKAKPDRPPIRALRAHLQAQPDMIFTLLSTLFTQLLFGSVNHWAIT
RPILSLMLASEEDFNAYKEHMISTQPSPENQVRLREEFMRLCADLQRNLE
PSNRERMGQKLTVFRVAVSQFLTS*
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Synonyms
Publications