jgi.p|Nanoce1779_2|636883, gene_581 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|636883
Unique Namegene_581
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1433305..1442552 +

Link to JBrowse

Properties
Property NameValue
TranscriptId636969
ProteinId636883
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1433305..1442552 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05540NO01G05540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636883mRNA_581-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|636883mRNA_581Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|636883

>mRNA_581-protein ID=mRNA_581-protein|Name=jgi.p|Nanoce1779_2|636883|organism=Nannochloropsis oceanica|type=polypeptide|length=1561bp
MDAYQQQQNAKEEAEQQQQQQQQREPGVRQDETRRNTTNSGNMTLFPVMS
KLEFFDLYDCPAQGWLLLAGTDQQRQSYRVLRLDKRCPVSFRTSLGQVLM
EEPHPYTPMEWSNRLMELQQQGQQQQQGQQGQQQGGGVRRIAVAYGLLGF
IKLVDCYYILLITQRREVGILAGNRIYGVKAMGMFPIKEGGREGGREGGK
EGGTLAQIWSLVSSKLNPTPQETAEARYVSLFQFLDLTKDYFFSYTYDLT
SHLQHNMLAASAKTFPPPPCVSDCGQVANDVEVEQIVHDEEGGGEEGALA
SYVQMRGSIPTYWSQETSMTAPKPPIVISRVDPTYRATEKHFADLFKPER
RPRESVVGEDFRRAVEYVNGTLPWEHKIRYCALDFSSISKYGSSSSSSSS
HQQFHHNPAGHGRPSSSPGKRGGGREGGKERKGGQSKTPSNLLLQALEDV
GLLLGPRPNRHLLLQPKLLNRSPPPRHRRSSVTEDEEDEDEGGREEVAQG
PYPVLSRGPSWSAASSSSSSTSSLSSSSVFGLAYRDRNRSRTAFSLDAWE
EKEEEGRGGGGGGGGGGGGGGGGGGGGGGGGGRWKKAKQEGGREGGREGG
REGGEGGTNVAQFMVGIQALGRQLAALGLLPPADGGRLEAGSPLAVIFME
MFTHVGDALALQYGGSGTNKRVGEKEEGREEGGGSATGLNKHRELLTTIR
RYYSNAFTDQAKQDAMNLFLGHFIPAQHDTALWELENDYFLHNTHVKSGG
LVAQRLYQQRMLAERADDEEAEEAEQAAAAAAVRQTSLSSSSLLSSSSSA
ASAAAAAAAAAASVGLEEEVGEEEEEGREEWREEGKEDYHPLDQDAATRA
QAAQRRLHLALLKRRVRRRCLRQMGELSAWWREALEGFTQLYPSRDLTEF
DALLAHDFAIPIPVILYAQREYQRLLLPFLLSPDDAKGQERLMREGGVGR
RMGGGPWLGMEGGAEVRVVIYLLTLLEEAVIEEEGGREKGKGKGGKEEEE
RKAKGKLPQSQQQQQWQQRQQQSQQQQQSQQEPPWQQQRRGSRTNTGRTF
GRVLAPTLEEGEDELEDEERKEEGRKGGREGRGERGRTLSYEDFVTMSSS
LMGRKKGKGGKEGRGEEEMGEEKALGEKREGGREGGREDRPPMDVLTACL
LGGPEWRQSLSSLLLLEEHEDHSSTADPPLALPLALPPGEEPQALPAPEK
KEEEEAAEAKREGGEEENEEIDRRIAAMHPLLPPSEWCSQSDTSLPPSVP
PGEGLLALLEEQVKGCREEGEWYRMYLDPASISAARSSLCGEESERLYRE
TVRGGEEEGGRKEEEEEEEEEGLEVEEEEEEGRRVPVWVLHPSSSSSLAS
SWRTGGREGGREGGREGECERRRWSSAGFLGKSDHSDSTLQPLSSSSASS
PSAGHAPSPPSARPPSLSTSWSASSLTSLGSATEEDVALALGPDLFSSGM
GMKGGGSGWGGKRKGGRREEEEESSDEEVEVELEGGRERGIEEGLIQVKQ
DEYVSSDNPFMLFNKAGAIGPHCLPSMRGGEGGMEEEEGGGGEVLVGGVS
ALLFRGRKGK*
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Synonyms
Publications