jgi.p|Nanoce1779_2|590215, gene_5758 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|590215
Unique Namegene_5758
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:506950..511300 -

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Properties
Property NameValue
TranscriptId590301
ProteinId590215
Product name2-oxoglutarate dehydrogenase E1 component
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:506950..511300 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004591oxoglutarate dehydrogenase (succinyl-transferring) activity
GO:0030976thiamine pyrophosphate binding
GO:0016624oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01860NO14G01860Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590215mRNA_5758-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590215mRNA_5758Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|590215

>mRNA_5758-protein ID=mRNA_5758-protein|Name=jgi.p|Nanoce1779_2|590215|organism=Nannochloropsis oceanica|type=polypeptide|length=1037bp
MAAQLVARLLHFAHRLPMKAFGSGTSGGIARPVPPQAATLLRALSTHSQE
SFMSGSNSVYVEEMYRAWLKNKESVHKSWDVYFTAIESGHTEGAFIPAPG
LQTAVSSPATAVAPRAAHHSDSLGLSYLIRAYQFRGHEAANLDPLGLHSF
RSSTPPPELDYKYHGFTDDDLDRVLNLQGSHKGGHKGFLFDLAQGRPVTL
RKVVDTLRQTYCQTMGVEYMHMGSRVKCNWIRARVETPLWLSYSKEKKLH
IFERLAYADHFERFLGNKYNTAKRFGLDGGESVIPGLKMMVDRASELGVT
DFVFGMPHRGRLNVLVNVLRKPMQLMFQEFQGTHYRMEKYGKKKDDWSMS
GDVKYHLGTSMTRSYPDGRTVHLSLLANPSHLEAVNTVVEGKARAKQFYM
GDRDDDKKKVVPVLMHGDAAFSGQGIVYETMQLAKVKDFATGGTIHIVVN
NQVGFTTDPAFARSTPYCTDLGKAFDVPIFHCNGDDPLSVTTAFEMAVDW
RQAWGEDCIVDVVCYRRHGHNELDQPLFTQPLLYTQIQKHPSTLEIFHKR
LVEDGTATQEELQRITKEVHAAYDKAFEESKTWQEAKDDWLSSKWEGFKS
PGQRSRVRETGIHVDRLREIGAKIASVPEGFVLHRQLEKILAARRKTVEE
GKGIDWGTAEALAFGTLLLEGNHVRLTGQDVERGTFSHRHCVLHDQKTNE
TYTPLNHIRPHLTNVRSTTDPAVPNSQARFIARNSILSEYGVLGFELGYS
LENPNNLTIWEAQFGDFVNGAQIMIDQFISSGESKWLRQSGLVMLLPHGY
DGQGPEHSSCRPERFLQCVDEDEDVIPPMGEEERQQVQHTNWQVVNCTTP
ANYYHVLRRQVHRDFRKPLVVIAPKSLLRHKLAVSSLEDMGEGTRFRRIH
REQCPDIRANHEKVTKVVFVTGKIYYELFQERENRGIKDTAIVRIEQLAP
FPFDKVADELSRYPNVEKIVWCQEEPKNAGAYFYCAPRIRTATRNILNKE
FDIKYVGRAPMAAPAGGLAKVHSKEQQAILDGTFSA*
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Synonyms
Publications