jgi.p|Nanoce1779_2|590182, gene_5742 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|590182
Unique Namegene_5742
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:463553..465417 -

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Properties
Property NameValue
TranscriptId590268
ProteinId590182
Product namePeptidase C13 family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:463553..465417 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004197cysteine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01720NO14G01720Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590182mRNA_5742-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590182mRNA_5742Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|590182

>mRNA_5742-protein ID=mRNA_5742-protein|Name=jgi.p|Nanoce1779_2|590182|organism=Nannochloropsis oceanica|type=polypeptide|length=420bp
MAQPPSLPPLLCLGLCLLSLAVRTTSSNEDGMDTWVVMACTSRFWFNYRH
VANALSFYRLVKRLGVPDSQIVLMLADDMPCNPRNARPGKVYRATTHATD
LCTDGIEVDYKGDEVTVENFVRVLTGRHPAGWPLSKRLLSTNRSRVLLYM
TGHGGDEFLKFHNHEEISSNDLAHTLEDMQAAGRFQDLFFIVDTCQGGTL
FRQLRTPGVLAMGSSGRGENSFAHQNDMKLGIALIDRFTDASCEYVHKLA
DRATTSELSSELAFLAQISLSMMLRSYNPVQLKSTPVLRTDYFRTDRKNE
GEEGGDINNNISEHFARISVAYFFAQSRQVRLIAMKAEDKDKDEDECWKS
NFSSSSSSSSSSSFDGSWQIFSVHGTNRPDSEPPSHVPIMSAHFLENRMI
HALAIFPVCAVSWAACRMR*
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Synonyms
Publications