jgi.p|Nanoce1779_2|590171, gene_5737 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|590171
Unique Namegene_5737
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:450338..453353 +

Link to JBrowse

Properties
Property NameValue
TranscriptId590257
ProteinId590171
Product nameAmidase signature domain-containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:450338..453353 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016884carbon-nitrogen ligase activity, with glutamine as amido-N-donor
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01670NO14G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590171mRNA_5737-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590171mRNA_5737Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|590171

>mRNA_5737-protein ID=mRNA_5737-protein|Name=jgi.p|Nanoce1779_2|590171|organism=Nannochloropsis oceanica|type=polypeptide|length=592bp
MRPTRLVLCGPSTSRRRPGHWLPRRPPAATTTTIDLCSISSRPPRTYACQ
PFPLPPSVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVTTMETAA
LAQAAAASQSTAGGRPLHGIPIAVKDNFCTAGVRTTASSRMLADFVPPYS
ATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPSSSSS
PSSSAYCGGLRLTAGGSSGGSAVAVATGACLAALGSDTGGSIRQPAALCG
LVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLG
DSSCWDGPHQLCFTEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAW
EEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYG
HRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRR
ILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAMSQVDVILTPVTPSGP
FPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLG
LQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRRTI*
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Synonyms
Publications