jgi.p|Nanoce1779_2|34886, gene_5678 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|34886
Unique Namegene_5678
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:300716..304082 -

Link to JBrowse

Properties
Property NameValue
TranscriptId34972
ProteinId34886
Product nameBT1 family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:300716..304082 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G01100NO14G01100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|34886mRNA_5678-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|34886mRNA_5678Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|34886

>mRNA_5678-protein ID=mRNA_5678-protein|Name=jgi.p|Nanoce1779_2|34886|organism=Nannochloropsis oceanica|type=polypeptide|length=609bp
MSRDLGLSGDAGFTLQDAHFEVDQIEYRLHPTSEPHHRAGYLRAPQEGTI
EEETAGFAVGEAGESLPPISPALPGVPPRRSIEEYRARYKERVHRLPADA
GFRDYLMFLPRAIYRFVDRLCDAFGFKFVALLMSVYGLSQGLGESYMAMS
SDYYLKDILKLEPASAQAFKSLMHLPWNIKPIYGLISDTLPIFGYHRGPY
IFLAGAFGVFAWITLALQRKASFGLAAFLLLLANYSIASPDVIIDAAVTE
RSQYAPMYASDLQSLSWGSHAMGGIIGCTTVGQAQAHIHSRGVFALTSLT
ALSIMVLAAMRWLPEKQIPPGAERSRACRHAWVKGGQRSLYLLAFFVAAC
AVFLATTVNHVEDRMIAGYITVAVAVLVTIVVYMVLVKISPKIAKPAIFF
FLREACQPNIAEAMFYFYTSDPNGPLFTPQFLGVLSCIGSVSMMIGIAMY
NRYMSSWKYRTIFIAAQVLMVGAGMLDWILVKRLNLRVGISDKAFVLGDE
ALVPILRRFSAMPFFVLAAKVCPERCEATLFALLMALSNFGGDVGSYIGV
GVLKAFHVHRGDYSELSNVVLVKTMCRFIPVFLIPLLIPDASPADEILTE
KIKRACVE*
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Synonyms
Publications