jgi.p|Nanoce1779_2|555412, gene_5633 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|555412
Unique Namegene_5633
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_11:171839..176039 -

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Properties
Property NameValue
TranscriptId555498
ProteinId555412
Product nameUbiquitin elongating factor core-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_11supercontigscaffold_11:171839..176039 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0051438regulation of ubiquitin-protein transferase activity
GO:0051443positive regulation of ubiquitin-protein transferase activity
GO:0051444negative regulation of ubiquitin-protein transferase activity
GO:0016567protein ubiquitination
Vocabulary: Cellular Component
TermDefinition
GO:0000151ubiquitin ligase complex
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL069ncniL069Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00630NO14G00630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555412mRNA_5633-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|555412mRNA_5633Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|555412

>mRNA_5633-protein ID=mRNA_5633-protein|Name=jgi.p|Nanoce1779_2|555412|organism=Nannochloropsis oceanica|type=polypeptide|length=1093bp
MSSWLSLGRRTPEGGADESKEASLPSPPTMDPEEVRRRRIERLEAAVAAQ
AEAARQQQEQDAAEMEVKEGPTPTISSSSSTPSSAGVAPSIPMDISTPSS
SQQETNPAASSSTTSSCAKIKASELAMHRLIQRVLYVTADANDTNGGSYV
EVPNPTAVEEGSTSIPLFTLDAVSELICARLSLNPGGGVGGDLIASTRTG
LLYMAGCYARQEEEARLRRPGVTVEALKELREQVINFGVSSIIEPDVFGL
SPAEITGQLSRGLVAMAESPAACTLPLGFLKGLLEGMEEGDIPRIFAPVL
SDLLGGLIRAQKLSDPGAVVNTHAIVLLLKQHKALAEALVVGVANFILPP
GGYPVQTMMGRVKMQRNGRVHENYTTLGVLFRLGFPETDPEVLAKFDQSE
RRSQQEVDGKMKTLQQQLKAHQAALTELLPTLLKAGGICKSRTIQWLSES
LALNLEAVKSQPNEQVKSSNTFLINLGSVLLGMCGNFVGDEKKRTMIDER
FLGDPKLNGGAFPPDLTMLKPLAGGEDGGEGGAGAARGAGEGKGEFNFLT
QCMFLTWRALHLGMVACIEKHEGFRQWLGRLRRERDAGTEGAEERYNMLV
QRYLVQEVALLEPDLLDKAMVFVGGASAWLSSKAFDPQALPNEDAALAFS
NICPEHLLKDLLTLVKFIGLSRPQSLVAAPLPPFFTLCIQALTRPQLVHS
PHLRAQIGDLLYYVFLPPEERQDSLPPSMMRGHAVYTSLLLSNPLAQASL
APALLLLYGDVEHTGFYDKLEHRFHITAVLKYLWGSPEHRKTFRRISEET
ARFTSFANGLMNETNALVASAMEKLPEIRQVQQQMKELVTWAAMPEQTRN
ELLERHNDNERSVSNIMLLCNETIHMLMYLTSDAAVRQPFLAPALCSRLA
NTLLSIVDKLVGARGLEIKVDNPDALNFNPKNMLREVSLTILHFAADAPF
HTALSESGYFKDGMLGKVQQTMKRLGGMDEQQLQAFAGLEAAVDIAAQQA
QAEELEVDIPDEFLDPLLCVLMKDPVRLPTSGSVMDRGSIEQHLLNQPTD
PLSRQPLSVEQLEPLPELKEKIEKWVEEQRAIKRKEREEGKK*
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Synonyms
Publications