jgi.p|Nanoce1779_2|671591, gene_5568 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|671591
Unique Namegene_5568
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:777429..792291 +

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Properties
Property NameValue
TranscriptId671677
ProteinId671591
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:777429..792291 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G03920NO12G03920Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671591mRNA_5568-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|671591mRNA_5568Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|671591

>mRNA_5568-protein ID=mRNA_5568-protein|Name=jgi.p|Nanoce1779_2|671591|organism=Nannochloropsis oceanica|type=polypeptide|length=1837bp
MNPPPSPNPPPGSSLPCPDAPPPSASGAPAPTPSPPSAAPAAPAGQTPPQ
QGQQSIPPVPPFKTSTTPTAAAGKTTMWEAQAERLKAADMTPEDQVAVLT
ELRDRVIETALATTVTEYPAFLENLLPIFESLIQTVPVQSVENAQHGIRH
AIIDMLERLLPSDTLSPHKERLLTLALDVVRKDNEENAVLGAKILSNLFK
AFRGKLESHVQPCFILVLDMYRLLPEAVGEAFAPSAASAMEEQSKEDGVA
SSPPSLDRLASEGSATGGGGGGKGGGGSLEKSKKVLTAGMKSFKVLVECP
FLIMVLSSYYGNIVQRQSWVAELIGLAVKGLELRPPEEAAIKQRTLFREF
LALQIKTVNFLSWNRQHAKLLVPYQDAMIASAVWLLQNCPGEFASNRKEL
LTAMRYMIQSEMREGFLVHVDVLLDEATLEGNVPSTASSSSSSGRPHDAL
RTSALNMLSELVSPLREKLTTQQLSAVIYLFSKHVQDPTLPLATQTLSVR
VILHLVDSICRGATTEQGAKQGRRLLFWILQTLVQKFGSLRAYLHKLEAQ
ERHKAVEQEANDQRALRQLSSSFPSSSPSSSPSIRSATAPGNAAVAGGGG
AAAVAALAAAGLATAGGLRKPNPAVVERVERVEMNESLRSGKDLIKTMMV
GLKTVIWCLLNPQQATARAQGQPAPPGTHPPSLPLPAEETALLHSFFEWA
LICLRIYSKASGSSGPEAKEIFELFVGALLVMEAPTLRSVMGRNLELYFN
VVLQDFHFLAIVQQLVSSNNAAVSAAVADMLVHFVIAHIHLLSGEEENTS
PHRSILVSFPSSSSSTTINEHSSPASSLMGSVNNSAVAPTLFRVFSVALH
SIAKFPENEIILRPHLKRLVLLCQRHALRCRQPFQYLCILRVLFRVISGG
KLDGLMRDMYPLLPQLLFGFYKLHERTEDDTDDHVRELLVELSLTVPARL
SSMVPFVALLMRMIVQALRSKPELAHIGLRTLEFWVDNLNVEYLWPILSQ
QPTILPDLLAALCEHLRPQPYPYGHLAARLLGKLGGKNRTLLKQAPPPSL
SSSSLQAKKGRAGIGGGKGGILMGGGLLGCRKGGEGLIITPSVLDASTKE
ASFEGGGDGMEEGEHVREVLFPVVFDWKRKEGGKEAAPFALPLDVCIETI
TSLLDRLLVASARPLLVETLGGKDGEKEKREGKEEEKKFLELSPKAFLTP
EMLLRKHKEAAWEVVVACVAALVVKDDDDPSSVTPLEPSHDQTKKRKSVH
DRFLDLLNSTVPSPPPSRPSSSHSSTPASPPPFGSSPGKKERNEEGKEAD
PSLLFTTLKNRRCLEKGNDLLRKLWMVVVGACGDSHLGATARVFARGLGM
HFLLVMGTHTEKIARAEGGGMEVEGAVPETEERDFDPLLFEASLNPLVMK
EAVLLALVDARSGVQDAALWFLQTLATSSIALQLLPSPALHPFFDDVLSS
LLRCLYLKRPRSKLGAAKGVRSLCQAMGARWTRRHEVLIVRDLLFVLKDQ
PNDASAPVTEDILSTLLSLLTLCHGPAPETAPADEKECRKEDEDKVKEEM
LRRVVELVVQDLGHAKAAVRVAVKTVLAHLDEVDASTSTTHSTAGGEKAT
VYGLLTEGKESLLKRLLEKKVHHPSTAKIGLIDALTYCLRTTRLPIIPTS
PPPALPPSAPAPGETVSAGETKTDGEAAAAPVPPSAAPAPTSASAPAPPS
VAPNANRTDLPSVKRKAAEAVRAEKEEEERRRNDGFARHGPRGCRLLRRH
DGSCRWQYCGNSGRSRARARRGLRHHPSKVPGGAKQNTRPRERHVPPRRF
ALSPPAPLLLPPSCRRHSAEQASSGIRRAFRASSAS*
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Synonyms
Publications