jgi.p|Nanoce1779_2|244906, gene_553 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|244906
Unique Namegene_553
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_3:1338639..1346625 -

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Properties
Property NameValue
TranscriptId244992
ProteinId244906
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_3supercontigscaffold_3:1338639..1346625 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0031177phosphopantetheine binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL047ncniL047Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05220NO01G05220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|244906mRNA_553-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|244906mRNA_553Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|244906

>mRNA_553-protein ID=mRNA_553-protein|Name=jgi.p|Nanoce1779_2|244906|organism=Nannochloropsis oceanica|type=polypeptide|length=2464bp
MTSTPEKRRPTEGGGNGGTGIGGPAIEMQGPPSPPKGSRRESSAPPAHSA
PGQARRVPCILPELWVTDPRLKQHRGVLDEVMARVHDWADLFDMHPPETL
NEVFQVSVEANQKRSVEPDMWAPVPDIMEALRETAERMGDEVFATWVDAG
DKINRHWTFRQTWEAAGAVAHALVTEWGVKPGDRVMLCYNFSYEYFPAFL
GCLRAGAVACPVYPIDPSKMEIALNKFKHVVEDTGARLVLTDKLINRVRI
GCSMFYSHLMPQTVEWKVTDHLVQPTYTSTFPAPSYDHPNRKPTDIAFLQ
YTSGSTGDPKGVMISYGNLGANVGLISGAQNFAFSYADLFPLTYEKHDEA
WYKRPRSVSWLPMYHDMGLVYGVVTPFYMGARMHYMSPITFLKDPCSWIR
LLAKEKATWAAGPDFAYRLCAKKWDASKWTTDDYTLTYMIYMHTGAEPIR
PTTMEDFNRVFRPYHLHARALSPCYGLAESVVCVSWFDPVANPPETMISK
GERPGYVCCAADWRVDLRIVDPETREEAEEGVAGELWVSGPSVALGYWNK
PEWSEKAFRARLTKAAPAETRPWGRFGNGKYLRTGDMAFMQDGRIYYSGR
LKDMMIVRGQNYYAQDIEFPAQDAWGAIRGGCLAAFSMDVEREEEEQLFI
VFELAPGRYSTEVFRENMERVARMVKTKVGLDVYRMIAVKDRTIPKTTSG
KIRRRATKEAMIMGRLWVLHDSLGLLPLGKGKGTATAAAAAAAAARASSS
MSGMPTLERSVSSSYLAGVGESIGGILGSLYDALADPLGAYAGLDTDLIA
GTLGRASSEGVVTMTTLTVVPREELREGGGEGGEGGGQRETIMMVGMGEG
GGSAHDHKARPSEWSTYRGASGAGGALMSPVIRSLPPSSSSSSSLTSVTL
QQQQQQQQQKPTLSSSLGCTSFNSSPSLTSFFSSAKAAATGLRKGQPQHQ
QHQSRSSSTLRDEITTHTSGRSSLIGPIPNLGLPSSAPAAVATAGASAGA
GGEATLPPAFPLSPPSTSTSASALSPEQLGKLSWRQREAALVETIVEICG
SVGLGKKEGNELSGETDMMSLGLSSIKAAELIGAIEARFWRGGMGEEMGG
REGGLSEVIMFECATLQDVAQQINRRLFKGRKEGEREGVAALVQRGGSCI
MGATGQVLAMGVTGALFTVSVLLPLQLCQLFLSSPAVAGVNYPWLLSALL
LLPAAYLLFLFCLMASLTLTKWAVMQGRYQEGTYSTSSFYYMRWAFTNNL
MSFARRNFVGVLKGTPIYTWWLQSMGLRLAAGAVGLHLPRLYSDDITEFD
LVYIGAGAVVGEQARVRGAVVEGGYLHLRPVIIGDHAVIGSQSTLLPGAM
LGKGAELAPASVLSGRSPELPPFTMWEGSPVKMVRPLPVPKEAAGAVAAN
RSWHRPLDSIMTNVLVPCLAVYSAGACLVLASFPAMILLGVLLLATSTGV
DTGAVEAGRSSVTWSDLMALKDYSWALIIAPMVATFGPLTLPFFAVMTGL
AGESLAAPLASTGVESTTSFLALARLAASEYYVVGVGVGVGLAYLLFGLA
LVMAAAVVQYVTGMLLILIFDNGIRSNSSNRNSSTIKTRARQWLVDYREL
FQAVLYMRFPVFLGGSIGYNLYLLALGANVHLDAFVASEHVIKNPSALVI
GAGAFIHPSALLHTSLAGGNTSNNSKIFIGQGALVGPSAVVGTLGTLEDA
STLAPLTYLPAGKRVHTDTTKCGYATLLRLKQPAPFLGRITSILAKIGWA
TFTFNYSWMAVVLYIALVYVASYPSFVIVQLALDYTASSSFSSITNGGVW
LPGLLMAALFPLFGLCLLASAVLLKRLAHPGYLPSKHHALGGSFYYRHLF
VTGYLKLIDRTFACLLYGSRLYNFYLSLLGLSVGRDSIIMTGNVLEGVDL
LSIGDKTVINRDVQISAVKLNPSSTLRPSLLLEVASVRIGHECTLGDATV
AMATSEMKDLGVSAGGTLMTPEIVCGRRVMVEGNLPYRVARGASEACVSE
GSSSNLLTPSGPFNAPLELIIPDCDLNHECVFFQNLAAVAPASSSPPPIP
STASLLPPTVLVTGANGFVGRHVVIELLQRGLHVVCLVRRRGHTLATDSR
SRMLASLQAAKLTLTAEQSLRLRVVDGDVSRPLLGLTRVLYEQLAEEVSV
IFHSAAMLGFAAPYSNLRETNVLGTKRALEFAVCRRVKRFNHVSSLLATS
LDMTNSMGRITEVSPLGNATVFPVLGASEWTHGYGMTKWAQEKLVLQAFE
AGVLGTIGRLGEVGPHSLTGCMEEGVLVDLVKETLEKGVVPMILGRVNVT
PVDYCARGLVRVGMEGWGLGRTYHLMDPNFDCGADTLVRLVEDLGYMNSD
SSSSSSSNSSSNSSSSTSNSSASAARCDFLSWRAKMKKEGARRSWFVAGI
LSGEQQLVGQNVDATEGGAIISREEAGKEVGMNGAILLRRFANYKGWKKE
REMVDVRVVVSPS*
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Synonyms
Publications