jgi.p|Nanoce1779_2|67346, gene_5464 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|67346
Unique Namegene_5464
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:478292..481723 +

Link to JBrowse

Properties
Property NameValue
TranscriptId67432
ProteinId67346
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:478292..481723 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0001906cell killing
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL015ncniL015Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02920NO12G02920Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|67346mRNA_5464-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|67346mRNA_5464Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|67346

>mRNA_5464-protein ID=mRNA_5464-protein|Name=jgi.p|Nanoce1779_2|67346|organism=Nannochloropsis oceanica|type=polypeptide|length=922bp
MAFAAAAYGPKTTAGKDPPLPRLLFTSSAPSGDVSDASPLPSFAEFVVRS
WGCTKEQGENYDKALALAETNLFGHLDEEAVDASNTSPLCPLAPTSLSAC
PSSASSVKDDEDPERPKPPLIEHLDDLAAEYFGRSWDRVDELVRVNQERL
EAWKAARAFQKNEQQQGQEHEQHGKDHEVEGSWPGLATFSSSSLSCARES
VTHQQQSQKRHSLLETTEGATTEGKEAEAATPAAAEEAKSGNRSCTQEGS
RYPPSSSSPEPALGSVIEINEGGIDLLLSGLPGPAVQNGRQTTIPNLEQA
ELILLEVHSDHCPACRRLAPSLAAAAAHYRDNPSVLFVTVNGPENPAFLE
RLDVQWFPTLKVIHRKSNMLWDWPPLPVGGLESEEIIKRMGEWLAQPSSL
SASGVDGVLMDQQGYYEDGEKGRDGGEGGEDGEGRGEGGASRAAAAVGPP
PGVSNDDEDQAKEGEGDTKRVEKNGAATPSPPHSTSSTFPPSLPFLQKRK
PSSSSPCAKPPKKTHLDTILNRPPGAAAADAAAVASQVPHDDQPPSFDQI
SQLHTELSCRRDLASRRKWVSAMEIFRALGCHDEASCRALTRAQGRGRDE
RVEPPHLILLGGGMGAGKTTLKKMVSQTEFWRKHGQHVVSVEADHFKAID
PVYQLLTRAKLPKASEQVHNYSTQAAEELFLSALKFRRDIIFDSTLAWAP
FLMQTLDMVRDNRHTYKRGPGYVETPSPPPSTGSNNGSISGENGKEGGSS
SMVVEERYWAIETTLPRDQQVTPYRVELVGVFVRPEVAVRRAIIRRLLTG
RGVPVRDQLRSHALFAKNFEKFSMTFDTVTLYDNNRRHDRVPGRGGGRGS
GRGGGNGEERLVGPRVIARKDVEDTELKILDVEAFRAFQAVARINTDATS
VDELYEERRMERGDGGERVVE*
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Synonyms
Publications