jgi.p|Nanoce1779_2|556496, gene_5412 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|556496
Unique Namegene_5412
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:375562..377172 +

Link to JBrowse

Properties
Property NameValue
TranscriptId556582
ProteinId556496
Product nameLate exocytosis, associated with Golgi transport-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:375562..377172 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556496mRNA_5412-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556496mRNA_5412Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|556496

>mRNA_5412-protein ID=mRNA_5412-protein|Name=jgi.p|Nanoce1779_2|556496|organism=Nannochloropsis oceanica|type=polypeptide|length=340bp
MPGIPDPQTAFAISGQAILLTLSAGTTIFLLVILGFSTIHRFNLFPRTYA
PRWYLHPNRTPMVMERHPRRLFSWVKDIYTIPEDEILRTVGLDALVFLRT
QRLYAILFLLCSVFGLGVLLPLNIKYGNPATNDSQFALTTMANLPPRNRI
GNTHVYRTNIAATWLFTAFTVGLLWLEYRSYIALRFKWLTLPRTHNYSVM
VTHIPPKMRNVAVLKAFFDRLLAPHGPQLGESIGKVLSVTLTMSLARLEA
LVTERATVHRKLEHTMALYAQPDSRLWRCLHRCFNRTGQQWRQDLLHDIR
LLSERLQTLNEVVECAQQEVRRLYYGYNDPSNFGLLDIEI
back to top
Synonyms
Publications