jgi.p|Nanoce1779_2|592421, gene_5402 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|592421
Unique Namegene_5402
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:351654..358756 -

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Properties
Property NameValue
TranscriptId592507
ProteinId592421
Product namehypothetical protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:351654..358756 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0005515protein binding
GO:0008270zinc ion binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL015ncniL015Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02380NO12G02380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592421mRNA_5402-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592421mRNA_5402Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|592421

>mRNA_5402-protein ID=mRNA_5402-protein|Name=jgi.p|Nanoce1779_2|592421|organism=Nannochloropsis oceanica|type=polypeptide|length=2129bp
MGKDRAKDRKKTQTSSSSGASSMLSGNGFIGFSDVVSLSSICGGGGGKLG
GGGGTFRSSFGGGGDASLGSNSAVSATPFYTGGDPDLLVICKRLSKKDQV
TKHKALLELGQLVQARGTTASSASSVVEGLIPFWLYVYPRLVLLEDDRRV
RESVFSTVLPKLFAANRKAMVGVLGRHLLGPWWAAMSDPQKEVANAATRA
FQTVFPKQGKRSEILTQAAPMILGYLHDNLHLKPGDAVLDMSGGVGSSPE
EAEERLERIVTCSLTALASFLVTLDEHTQARLLNSATMVAAPPPRPPPTA
DSSSIPAASAVVPTFFLIDGNSSSLEDIIRDSTIWKFMSDTRPLVRRAAY
GLLAAVAEKAEHAIRQTGQVGKIAQHVCGLLAEKETANFGNMWEAILLFF
NHFPKVLTTTLDCNTQLFPRVLKLVRTSFLGAAQASCPSLLPLVALVNPA
AADTSFYTDLLEALWKGAKADKSDGEEPYLVATVEIATFLLVRQPSEEQE
RGGEGNRPKVSEISAALIGAEEGLVLVGKILAVLARVLTREDGAVDGPAS
IALVTALTQLEKAGLEGRRGRKCMLLDVKSKAWQGIWAVALRVLGLEASE
GGISSDWEAAVLIHIHAAKTSRETQTRSTRLWQLLIAAYEKGLGSRASLK
AAEEETGLESTLRFLFWQCILHCEAHKNLHGDVLVPYLSLIEAITLHLPF
RLLASAAPSSVYASTSSFVVAFLIPLLQKTIETADAEVVAIGILKPLIGI
ITILCLELGGKGCWQEVLNAVTPTENRSGAGGLGLQLYALEIISATYEEC
VRVSVDAQKAVPALNSLLSNAVAPYTLALIEGEKAVEAKEEHVRFLAVCL
GVAGEVATTDCSETIMQKRRRTRQLPLLAPAAVEMLVEHTIACQHEIGLE
ALVLALDEGDQDCPVLDVVRSQAATILTMAFQKLGAAGDVRIASVLSMGG
SGDDEDEEERGEEQRIAQVCTPGFRHQGVFWLRSLLVRVNDPQHEQKWAD
DFVRLVEILSSASHEPASHFIPALLYEAGLADASLWAGVRSQPQALSSMW
RCLEAVMHELAEKGLLHAASDAAMVLIRPGASKGETVSLIHEVLRAGVEL
GERVSMTVPVPGRSTFFFSRFLSAMAKEDVLPSDTPFQLFFPAGDDDEED
QGMAAVPFVPWDIADLLSQIVEKQLQVLAVSSSWADAYLLARVISLLESA
AGHEVGSQALKPVNQTAWSRVVLPKELAVFFDSAEELQLGTEVWFLDKQK
VRSFSSSEAVTPSPPESAWKRGKVVGVHRDDVEKYFTVSKASGGETQMEY
NRLRRAKPSDISGLVAGVCEGLPDLQFVDAVHHYRHHQLEGEANQHLKTI
AQFLIAAVTPYLKDSVGVRSNLVLAWSAGEVLRGLRVLASSPCSSPSLQA
NVDEWMGKLQARWCDFSEAALQGVEGKQDWSHVASSLYVLGGLPPLDMAE
ASRLWSAAVRVGVVSGTKRQQRSKNPSAGREATSETSTVVLFHVSEAAQN
AALCWAGGLSTACREQAACLEVLENMWDLQISSRATKGAYFMPGTFLAAL
DLGLQTVLEKGSLALHSSTKASLFRLALQGFSSPSSTATEPTVFSVLAHE
IHKRCRLLAVALIPFDNRNLEWTTRIYAAQYSSSPASSSATLVLNLALWN
TDVDALLHVLESEGEWASSGLHMSTFHVLRPYMRSATDASDDGVDSEDED
EVSEDYPTTQGKGDVVALMNDPHAKALATDATERRDMARDLRIVDRRVWP
TFHRILQSWVSPRGDASNGAAESSYSQPHPTQRLACLLKWEGVLEAVGDD
GVTSENSVMEINLLGTYRRGVFQALLAWLLFLEHMEDVALSPPLRDAYST
YISVLGALPLLLQACFRILGRRVGATVDTTGCQYELQDLWATAYALGCEG
PSAATSAGGREMRRLVAYVLFRTIVTFPALVRKWWSSNCERWLSTGIFKF
VEEQASGRIVQREVGLLLANGKGPDCPWGGGEDEIIVRGSAVTREVTAHY
YKDDCTLEVLLRLPLAYPLRNVEVECTRSLGVSADKWNRWQLQIVTLLSM
RDGSVVDAVALWVRNLQKEFEGMNPCPICMSIIEARNLSLPERECRTCHN
KFHNSCILKWFATSGKNRCVLCQQASIG*
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Synonyms
Publications