jgi.p|Nanoce1779_2|556474, gene_5401 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|556474
Unique Namegene_5401
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:346436..351482 -

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Properties
Property NameValue
TranscriptId556560
ProteinId556474
Product nameArmadillo-type fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:346436..351482 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL015ncniL015Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G02370NO12G02370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556474mRNA_5401-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556474mRNA_5401Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|556474

>mRNA_5401-protein ID=mRNA_5401-protein|Name=jgi.p|Nanoce1779_2|556474|organism=Nannochloropsis oceanica|type=polypeptide|length=1513bp
MGGRGSQPLGEAYLMDTGNSRTELAKRLKTVWEHLAKLSQDDRPKGLEGT
TKALGSSRILDHTDKDVRLFTACSLAEVLRIYAPEAPFSSPVLMQGFALV
TAQLRGLSAITGKQAQVAAAQGHRPVPVLYLLHSLATVKSCIILSELVQQ
DLPRAEEELVDFFDCLLRVVQEDHPPELREQILEVLAACLAELEVIPQAL
LDALLLCLLPEHKAESPASYHLTQLFVARCFAELNPPITAFINQVLTGKG
CGVSEVEEEHIYPLIYELHKVNPNFMLYIFPNIATQLAAEDTAVRTRAVA
LLGRLFAASHVDYGHDYPRIFREFLGRFKDMEAAIRAQAVGIGAIIMQRK
PKLADQIVPLLVARLQDPEWEIRAKAVKETCQVALQSIELVTGALLKEVG
GRLADRKAQVRLEVVRGLATLYAAYVSRTWSEAERAREALPPDLKEKLAW
IPGTVLMGYSLPDHDLRLCILHAFDEVLLPKTAECQARTTGLLFIWQRLG
AEERRAFRVVLQDRATVQARVREYVAARTSWRADMEDEAREVRLQEAGEA
LLDAVPPLDKRAASSSLPLKLNETKDQQAPKLLQTMVDPRHSMPHLLKAR
DELAAKLGSKTSLGDYVRMLARRASSCFATQETLADLIQAVRELLEAGEE
DDEEIMESSLDAAVDLVELLVENFPVLLPRSLPELLGLCWAAEKEDGVQV
RVLRLIATRAKAASRAAAVGADKSDGRLTSMSPKGEAEMLAKFRQDVLKL
CLKTGSAKATRLAVSALCQLVPAGRDAVYARLLKDLTSTKFLSLDSPRLE
AVLRALAVLAERHPVIFETHTDAVRGFALHKVLRNDAPKVGGQVSDGSDS
GAGSLPHLLEKTSKKKAASRERGRNRELSEDCLRACAAIKLLVAHAVGLR
AGGMASAGEVLDLLYEILEADGQTPNGVELSRADKARLRLVSAGGVLKMM
RNQYVQHRLLDTPRWRALAWVMLDPEETVASAFTRKLAKAVRRSKVHLKF
LALLSLAALDEGMDARKEARQAVIRAVQNLRRGYEDYMASQEDEPSEEAK
RKVTTSMMPEYLLPYLLHLLAHFPDFPTSLNDGGRWRPLHRCLAFLLEPL
MATLGAEADNLSFLLLMTDTILTGYTDAASESEEVGEDKEGGTSRLHQVT
MACRDFLRSKIKTQENLQSYPGKIYLPLQLYAPRNGGPLIKQRVKLKQGK
QGGRGASRPAIKEGRRVVESDDDAGMEEGEEGRLEGETVEPDWGLSPIAM
ELSTTAAGALVRRSGGRGGAKDEVVQKKGAKGGQAAKHGRKGKGAGKKSV
ANARRKNKGRKMDTENEEEAGESEKEVMEEEEEDDEENLPPVPTAVLRKR
KSVAGRGGTRISGKKKALGGSGIKSLKRTGSSVFDYDGMDENNDGFDVEG
MDSEVEDLMKEVEKEKARNGRKSLQVQRASRVERALKRWGASVEGKEGGK
EEMLAPLTVSRGNRSANRSAAPVVQITNTKGKETHEAAPTEEVEEMEPVS
AAPKKRKKRAVG*
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Synonyms
Publications