jgi.p|Nanoce1779_2|592072, gene_5305 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|592072
Unique Namegene_5305
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_13:120544..123075 -

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Properties
Property NameValue
TranscriptId592158
ProteinId592072
Product namemitochondrial-processing peptidase subunit beta
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_13supercontigscaffold_13:120544..123075 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0017087mitochondrial processing peptidase complex
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0046872metal ion binding
GO:0004222metalloendopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL014ncniL014Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO12G01450NO12G01450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592072mRNA_5305-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592072mRNA_5305Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|592072

>mRNA_5305-protein ID=mRNA_5305-protein|Name=jgi.p|Nanoce1779_2|592072|organism=Nannochloropsis oceanica|type=polypeptide|length=462bp
MMMRRVGRAVSSPSISSAHSLRRGLASLPGYVTSAPAAVTSRLSNGISVA
TEAGPDDLAVVSVWIEAGSRYEAPSLSGASNLIARLALKGYENEVAKIGG
AVKAWTSREMTVVSASVLKADVAAATTLLGQVVTNPKFGDADVDAEKAAV
LAEMESVTVDAHEQLLFEHLHATAFQDTPLAQPIAGSPETVANLHRSSLI
DFMKGNFTGSRMAVAGTGGVTAEGLAANVGGWSVANGLVGALDGPAVPSV
FTGSDVRARFDSYPLAHVALGFETAGWTSKMQIPLLVVQTIIGSWDKASG
VGKNGTSALSRNVAENELATSYTAFNLAYKDTGLFGVYFVAPENKLEDLA
WYTLHALLKVVHQTTEEEVEYAKAQLKSNYLSSISSIAGANDSLGRQMLT
YGRVMSPAEFFARVDALGVADVKAVADQVVNDQDHALAGVGPLHELPDYN
WIRRRSYWLRY*
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Synonyms
Publications